Pairwise Alignments

Query, 245 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  126 bits (317), Expect = 4e-34
 Identities = 68/189 (35%), Positives = 106/189 (56%)

Query: 54  HLRTVFVATVAATIVAVSLAIIVTRKAGAEFLPLSRSLVNIGQTFPPVAVLALAVPIYGF 113
           HL  V  +  AA  V +   I ++R    +         N+G T PP+AVLA+A+ I G 
Sbjct: 55  HLVLVLASMAAALAVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGI 114

Query: 114 GEKPTLIALFLYGLLPIFENALTGLTTLPPTVMEAARGAGMTGRQRLFRIELPLALPVIL 173
           G  P + ALFL  LLPI  N   GL  +P ++ EAA G GMT RQ+L+++ELP A+P+I+
Sbjct: 115 GAGPAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIV 174

Query: 174 TGIRLSVVISLATATIGSTVAARTLGEVIIAGLQSNNLAFVLQGGLIVGALAVLIHDALQ 233
            G+R+++ +++ TA +   + A +LG +I  G+  NN   +L G      LA+++  A+ 
Sbjct: 175 GGVRVALALNVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALVLDAAVS 234

Query: 234 GLERAFAGR 242
              R +  R
Sbjct: 235 FSSRRWLER 243