Pairwise Alignments

Query, 245 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 354 a.a., L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 50/193 (25%), Positives = 101/193 (52%), Gaps = 2/193 (1%)

Query: 52  VLHLRTVFVATVAATIVAVSLAIIVTRKAGAEFLPLSRSLVNIGQTFPPVAVLALAVPIY 111
           ++ L  V  A +   ++ + + I + R   A    + R L++  QT P    L   V ++
Sbjct: 146 MITLALVLTALLFCVVIGLPMGIWLARSPRAA--KIVRPLLDAMQTTPAFVYLVPIVMLF 203

Query: 112 GFGEKPTLIALFLYGLLPIFENALTGLTTLPPTVMEAARGAGMTGRQRLFRIELPLALPV 171
           G G  P ++   ++ L PI    + G+  +P  ++EA+R  G + RQ LF+++LPLA+P 
Sbjct: 204 GIGNVPGVVVTIIFALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPT 263

Query: 172 ILTGIRLSVVISLATATIGSTVAARTLGEVIIAGLQSNNLAFVLQGGLIVGALAVLIHDA 231
           I+ G+  +++++L+   I S +A   LG++++ G+   ++     GG+ +  LA+++   
Sbjct: 264 IMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRL 323

Query: 232 LQGLERAFAGRAH 244
            Q + R    R +
Sbjct: 324 TQAVGRDSRSRGN 336