Pairwise Alignments

Query, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 217 a.a., choline ABC transporter permease from Pseudomonas simiae WCS417

 Score =  149 bits (377), Expect = 6e-41
 Identities = 84/204 (41%), Positives = 121/204 (59%), Gaps = 11/204 (5%)

Query: 188 GRHVTLALGSLAAATIVGLPLGILCHRVERLRAGVLNVLNAIQTIPSIALFGILIAPLGW 247
           G+H+TL   ++  A ++G+PLGIL  R   L   +      + T+PSIALFG+L+     
Sbjct: 20  GQHITLVGIAVILAILIGVPLGILMTRFPTLAGPLQASATVLLTVPSIALFGLLL----- 74

Query: 248 IAANVPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIGMTDR 307
                P  +  G +G+G  PA  A+FLYSLLP++ NT + L GV     +AARGIGMT  
Sbjct: 75  -----PFYSKFG-QGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGMTFG 128

Query: 308 QRLVAIEFPLAFPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGVGQTAMDLVLLG 367
           QRL  +E P+A PVIL G+R  +V NIG+ TIAA IG GG GV +   + ++ M ++++G
Sbjct: 129 QRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAGGLGVLILASISRSDMSMLIVG 188

Query: 368 AIPTVVLAFTAAIVLDALIEMTMP 391
           A+   +LA  A ++L  L     P
Sbjct: 189 AVLVSLLAIFADLLLQWLQRSLTP 212