Pairwise Alignments

Query, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 283 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 20/204 (9%)

Query: 184 WTEAGRHVTLALGSLAAATIVGLPLGILCHRVERLRAGVLNVLNAIQTIPSIALFGILIA 243
           W +  + + L + +   + ++G+PLGIL  R  RLR+ ++ +L+ +QT+PS     + + 
Sbjct: 89  WDKLMQTLALMMVATVISVLIGVPLGILSARSNRLRSVLMPLLDIMQTMPSF----VYLI 144

Query: 244 PLGWIAANVPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIG 303
           P+            + + G+G  PA  A  +Y+  P++  T +G+  V     +A    G
Sbjct: 145 PV------------LMLFGLGKVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFG 192

Query: 304 MTDRQRLVAIEFPLAFPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGVGQTAMDL 363
               Q+L  ++ PLA P I+ GI    +  + +  IA++IG  G G  V  G+    +  
Sbjct: 193 ANRWQQLFGVQLPLALPSIMAGINQTTMMALSMVVIASMIGARGLGEDVLVGIQTLNVGR 252

Query: 364 VLLGAIPTVVLAFTAAIVLDALIE 387
            L   +  V+L    A+V+D + +
Sbjct: 253 GLEAGLAIVIL----AVVIDRITQ 272