Pairwise Alignments

Query, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

 Score = 82.8 bits (203), Expect = 1e-20
 Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 41/235 (17%)

Query: 122 FWVLVFAFSLLLADALTRLNPGPGLRLLVFAGVLVLAGGMLVTGRWDDLSIVKEYANRAD 181
           +W+L+    LL   A   L     LR  V   +L L G   + G WD L           
Sbjct: 55  WWLLLLLVGLLAWHASRSL-----LRSAVLVALLALIG---MLGLWDKLL---------- 96

Query: 182 LFWTEAGRHVTLALGSLAAATIVGLPLGILCHRVERLRAGVLNVLNAIQTIPSIALFGIL 241
                  + + L L S     +VG+PLGIL       R  +L VL+ +QT+P+     + 
Sbjct: 97  -------QTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDVMQTLPAF----VY 145

Query: 242 IAPLGWIAANVPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAARG 301
           + P+            + + G+G  PA  A  +Y+L P+V  T +GL+ +  +   AA G
Sbjct: 146 LIPV------------LMLFGLGKVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHG 193

Query: 302 IGMTDRQRLVAIEFPLAFPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGV 356
           +G +  QRL  I  PLA P I+ G+   ++  + +  +A++IG  G G  V  G+
Sbjct: 194 LGASRWQRLRRIALPLALPSIMAGLNQSVMMALSMVVVASMIGARGLGEDVLAGI 248