Pairwise Alignments

Query, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  139 bits (351), Expect = 7e-38
 Identities = 97/249 (38%), Positives = 132/249 (53%), Gaps = 32/249 (12%)

Query: 145 GLRLLVFAGVLVLAGGMLVTGRWDDLSIVKEYANRADL-FWTEAGRHVTLALGSLAAATI 203
           G  LL +A VLV+   ++    W  +  +  Y  R DL F+ +A  H+ L L S+AAA  
Sbjct: 16  GKGLLGWAAVLVILALLV---HWIGIDTIARY--RDDLGFYLQA--HLVLVLASMAAALA 68

Query: 204 VGLPLGILC---HRVERLRAGVLNVLNAIQTIPSIALFGILIAPLGWIAANVPGAAAIGI 260
           VG+P GI     HRV++     +   N   TIP +A+  I                A+ I
Sbjct: 69  VGIPAGIALSRPHRVDKAER-FMQFFNVGNTIPPLAVLAI----------------ALSI 111

Query: 261 RGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIGMTDRQRLVAIEFPLAFP 320
            GIGA PA  ALFL SLLP+V NT  GL  VP +  +AA GIGMT RQ+L  +E P A P
Sbjct: 112 LGIGAGPAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVP 171

Query: 321 VILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGVGQTAMDLVLLGAIPTVVLAFTAAI 380
           +I+ G+R+ L  N+G A +A LIG    G  +F G+       +LLGA  T +L    A+
Sbjct: 172 IIVGGVRVALALNVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALL----AL 227

Query: 381 VLDALIEMT 389
           VLDA +  +
Sbjct: 228 VLDAAVSFS 236