Pairwise Alignments

Query, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 343 a.a., ABC transporter, membrane spanning protein (proline/glycine betaine) from Agrobacterium fabrum C58

 Score = 86.7 bits (213), Expect = 9e-22
 Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 183 FWTEAGRHVTLALGSLAAATIVGLPLGILCHRVERLRAGVLNVLNAIQTIPSIALFGILI 242
           +W      + L + + A   I+G+PLGIL  R + + AG+   L+ +QTIP+     + +
Sbjct: 151 YWKATTETLALVIAASAVCMIIGIPLGILAARRKWIYAGMRPALDLMQTIPTF----VYL 206

Query: 243 APLGWIAANVPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAARGI 302
            P            A+ + G+G  P  +A  ++++   V  T +G+   P A  +AA   
Sbjct: 207 IP------------ALVLFGLGMVPGLIATVIFAIPAPVRLTRLGIVSTPPALVEAAVAF 254

Query: 303 GMTDRQRLVAIEFPLAFPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGVGQTAMD 362
           G T  Q L  +E P A P I+ G+   ++ ++ +  I+AL+G  G GV V + +    + 
Sbjct: 255 GATPSQVLRKVELPFAAPQIMAGLTQTIMLSLSMVVISALVGANGLGVPVVRALNTVNIA 314

Query: 363 LVLLGAIPTVVLAFTAAIVLDALIEM 388
           +     +  V+L    AIVLD L  +
Sbjct: 315 MGFEAGLCIVIL----AIVLDRLFRL 336