Pairwise Alignments

Query, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 302 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 97.1 bits (240), Expect = 6e-25
 Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 21/231 (9%)

Query: 146 LRLLVFAGVLVLAG-GMLVTGRWDDLSIVKEYANRADLFWTEAGRHVTLALGSLAAATIV 204
           + +LV   ++ LAG    +TG     + +  +   A   W +A   +++   +   A ++
Sbjct: 69  ITMLVILAIVHLAGRSFKITGG----TAISLFMIGAVGLWRDAMTTLSIVTIATLIAIVI 124

Query: 205 GLPLGILCHRVERLRAGVLNVLNAIQTIPSIALFGILIAPLGWIAANVPGAAAIGIRGIG 264
           GLPLGIL  R ERL+  +  VL+ +QT+PS     + + P+            + I GIG
Sbjct: 125 GLPLGILMGRSERLQRLINPVLDVMQTLPSF----VYLIPV------------VVIFGIG 168

Query: 265 AAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIGMTDRQRLVAIEFPLAFPVILT 324
             P  +A+ +Y++ PV+  T +G+  V     +AA   G ++ Q+L  ++ PLA P I+T
Sbjct: 169 KVPGLIAVVIYAIPPVIRLTSLGIRLVDREVLEAADAFGSSNGQKLFNVQLPLALPTIMT 228

Query: 325 GIRIVLVQNIGLATIAALIGGGGFGVFVFQGVGQTAMDLVLLGAIPTVVLA 375
           GI   ++  + +  +A+++G GG G  V Q +      +  L     V +A
Sbjct: 229 GINQTIMMALAMVVVASMVGVGGLGKNVLQAINNQFFTVGFLNGFALVAIA 279