Pairwise Alignments

Query, 228 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 222 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  120 bits (301), Expect = 2e-32
 Identities = 62/213 (29%), Positives = 118/213 (55%), Gaps = 1/213 (0%)

Query: 13  LNFAAVWRSFDLLLEGLALSLGLAFVAILAGCVIGLITAFGLIS-RRALLRKPAGLYVTV 71
           L+F+ VW+ +  LL G  +++ +   A+  GCV+GL+   G ++ +R  +      YV  
Sbjct: 3   LDFSPVWQGWPDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWIYGACTAYVAA 62

Query: 72  IRNTPILVLVLFSYFALPELGVRLGKIESFVATLAIYSGAYLAEVFRGGLIAIPPGQREA 131
           IR TP+LV +   +F LP  G+ L      V  L +YSGAY++E+ RG + +I  GQ  A
Sbjct: 63  IRGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMA 122

Query: 132 GLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISLFKDTSLAAAIAVPELTFEARKINVE 191
             ++G+T       I++P  +  ++P LG+  I+L K+++L + + + ++  E +KI   
Sbjct: 123 AQSLGMTPGVAMRQIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISV 182

Query: 192 TFRVIETWIVASCLYVATCSLLAALMRAAERRL 224
           ++R +E ++  + +Y      +  ++R  E++L
Sbjct: 183 SYRSLEVYLAIAVVYFVLTGTMTLILRHFEQKL 215