Pairwise Alignments

Query, 228 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 249 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  127 bits (318), Expect = 3e-34
 Identities = 66/199 (33%), Positives = 114/199 (57%)

Query: 9   MTYSLNFAAVWRSFDLLLEGLALSLGLAFVAILAGCVIGLITAFGLISRRALLRKPAGLY 68
           M YSL+FA +   + + + G  L+L +  +A++ G  +G + AF   S+  LL +   +Y
Sbjct: 1   MKYSLDFAPLASYWPVFINGAWLTLKMTALAVVIGVAVGTLVAFAKRSKIRLLSRACTIY 60

Query: 69  VTVIRNTPILVLVLFSYFALPELGVRLGKIESFVATLAIYSGAYLAEVFRGGLIAIPPGQ 128
           + ++RNTP LV +   YF L   GVR+    + V  + I   AY AE+ R GL ++P GQ
Sbjct: 61  IEIVRNTPFLVQIFLLYFGLASFGVRMPTFAAAVLAMVINIAAYAAEIIRAGLESVPRGQ 120

Query: 129 REAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISLFKDTSLAAAIAVPELTFEARKI 188
            EA   +GL++ +I   +++   +  V P+L S  + + + +++A+ I+  ELT  A  +
Sbjct: 121 IEAAECLGLSKWRIGWHVMLQPSIEKVYPALTSQFLLMMQASAMASQISAEELTAIANTV 180

Query: 189 NVETFRVIETWIVASCLYV 207
             +TFR +ET+IV + LY+
Sbjct: 181 QSDTFRSLETYIVVAALYL 199