Pairwise Alignments

Query, 228 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 223 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  132 bits (332), Expect = 5e-36
 Identities = 72/215 (33%), Positives = 120/215 (55%)

Query: 9   MTYSLNFAAVWRSFDLLLEGLALSLGLAFVAILAGCVIGLITAFGLISRRALLRKPAGLY 68
           M Y   F AV+ ++ LLL+G  +++ L+ +A + G V+ +  A+G  S    LR     Y
Sbjct: 1   MNYQFQFDAVFAAWPLLLKGTWITIQLSLIATVLGLVVAIFCAWGKTSGPGWLRFIINAY 60

Query: 69  VTVIRNTPILVLVLFSYFALPELGVRLGKIESFVATLAIYSGAYLAEVFRGGLIAIPPGQ 128
           + VIRNTP LV + F +FALP +G+R     + +  + +  GAY  E+ R G+ +IP GQ
Sbjct: 61  IEVIRNTPFLVQLFFFFFALPAIGLRWSPQTAALVAMVVNLGAYATEIIRAGIESIPKGQ 120

Query: 129 REAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISLFKDTSLAAAIAVPELTFEARKI 188
            EAG A+ L   +I   +II   L+++ P+L S  I L   +++ + I+  +LT  A  +
Sbjct: 121 IEAGRALNLKPWEIFRFVIIKPALKAIYPALTSQFILLMLSSAVVSVISADDLTSVAANL 180

Query: 189 NVETFRVIETWIVASCLYVATCSLLAALMRAAERR 223
             +TFR  E +IV + +Y+A     +A+ +   +R
Sbjct: 181 QSQTFRSFEIYIVVAAIYLALALAFSAMFKLIYKR 215