Pairwise Alignments

Query, 228 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 235 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  120 bits (301), Expect = 2e-32
 Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 12/215 (5%)

Query: 25  LLEGLALSLGLAFVAILAGCVIGLITAFGLISRRALLRKPAGLYVTVIRNTPILVLVLFS 84
           LL+G   +L ++ +      V+G+  A G  S R  L +  G YV++ RNTP+LV + F 
Sbjct: 18  LLDGWLTTLWVSLLVSAGATVLGVFIAAGRSSSRPALLRATGAYVSLFRNTPLLVQLFFW 77

Query: 85  YFALPEL-------GVRLGKIESF-----VATLAIYSGAYLAEVFRGGLIAIPPGQREAG 132
           YF  P +        V  G + SF     +  L +Y+ AY+ E  R G+  +P GQ  A 
Sbjct: 78  YFGAPAVLPEAVREWVYAGHVLSFELLSALVGLTLYAAAYVGEDIRSGIRGVPAGQALAA 137

Query: 133 LAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISLFKDTSLAAAIAVPELTFEARKINVET 192
            A+G T  Q+ + +++P  LR  LP L    +++ K+TSLA A+ + EL++ +R++  ET
Sbjct: 138 SALGFTRAQVMSQVVLPQALRIALPPLLGQYMNIVKNTSLAMAVGLVELSYASRQVEAET 197

Query: 193 FRVIETWIVASCLYVATCSLLAALMRAAERRLAVP 227
           F+  + +  A+ LY+AT   +  L     RR   P
Sbjct: 198 FKTFQAFGFATLLYIATIGAIELLAAWTARRQGRP 232