Pairwise Alignments

Query, 280 a.a., amino acid ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 277 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 76.6 bits (187), Expect = 5e-19
 Identities = 71/274 (25%), Positives = 112/274 (40%), Gaps = 16/274 (5%)

Query: 2   ISRFTVAASFVAAVLAAMPAQAQQASSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQ- 60
           +SR     + +A  + +        + +LD+V   G L +     N P+ +     K Q 
Sbjct: 1   MSRNKFIVTSLALAIGSFTLGGAAWADRLDDVRKAGVLRVAAFDGNPPFGYIDPASKKQV 60

Query: 61  GFDVDMGRIIAKALFGDPEKIEFVNQSSDARIPNITTGKVDITCQFMTVTGERAQQIAFT 120
           G D+D+    AK+L     KIE V  +   RIP +T+GKVD+     T+T ERA+ + FT
Sbjct: 61  GHDIDLATEFAKSL---GVKIELVPTNPANRIPLLTSGKVDVVFASFTITDERAKAVDFT 117

Query: 121 IPYYREGVGLMLKADGKYADYEALKAAGSSVTISVLQNVYAEDMVHAALPEATVDQYESV 180
            PY+  G   + K  G   D   +K     + I   +    E  +    P+A V  Y+  
Sbjct: 118 TPYFLVGQQFLAK-KGVLKDAAQIK----DIRIGTEKGTTMESNLRKNYPDAKVVLYDDS 172

Query: 181 DLIYQALESGRADAAATDQSSLA--WYMTQNSGRYKDAGYGWNPQTYACGVRRGDQDWLN 238
                AL +G   A   D   L   W    +  +Y+      + +     V +G+   L 
Sbjct: 173 PFALAALRNGNVQAITNDGVKLTAQWNAIPDKEKYEIPPITVSKEYLGAAVPKGEARLLE 232

Query: 239 FVNTALHEA-MTGVEFDFYAKSFKTWFGKDLTPP 271
            +NT L ++   G     Y     TWFG +   P
Sbjct: 233 ALNTWLVDSEKNGRALAIY----DTWFGPNSKAP 262