Pairwise Alignments

Query, 441 a.a., nitrate transport protein from Sinorhizobium meliloti 1021

Subject, 404 a.a., Nitrate ABC transporter, substrate-binding protein from Pseudomonas sp. S08-1

 Score =  184 bits (468), Expect = 3e-51
 Identities = 134/385 (34%), Positives = 183/385 (47%), Gaps = 25/385 (6%)

Query: 43  GFIPLVDAAVLIAAAEFGFAQREGITLELVKDVSWANVRDRLAFRQFDVAHMLSPMPVAA 102
           GF+ L D+A LI AA  GFAQ  G+TL L +  SWA +RDRL   + D A  L       
Sbjct: 29  GFMALTDSASLIVAATQGFAQPYGLTLNLQRQASWAGLRDRLLSGELDAAQALYGQVYGI 88

Query: 103 MLGLGSNPSPTIAPFSLGRGGNAITLSTRLYGLMQQAGGLGGGEDALKNAKALAAVIRSA 162
            LGLG   +       L + G A+ LS  L    +QAG   G        +ALAA +R  
Sbjct: 89  HLGLGGTATEMAILMGLCQNGQALNLSQPL----KQAGVTSG--------EALAARVRQG 136

Query: 163 GAAGKPPLTLGVTYPFSSHNYEFRYWLAAGGIDPDRDVKLVVVPPPMTSDALAAGAIDGF 222
           GA     LT   T+P  +H     YWLAA GI P  DV  VVVPP      L A  IDGF
Sbjct: 137 GAK----LTFAQTFPTGTHAMWLYYWLAAQGIHPLEDVNTVVVPPSQMVAHLRAARIDGF 192

Query: 223 CVGAPWNMVASERGVGRIVATKQDIWPSAPEKVIGMRPEWAEANRDTVSRLVVALDRAAR 282
           C G PW  +A E   G  + T Q+IW   PEKV+G+  E+ E   +T   L +A+  A+R
Sbjct: 193 CAGGPWGALAVEEDQGFTLTTSQNIWADHPEKVLGVTREFVEQYPNTARALTMAVLEASR 252

Query: 283 WSDE-PANRGRLAEVLAEERHVAAPADIIRRVLAGEFAIDPEGNRRVVENYLVFHA-GFA 340
           + DE   N+   A++++   +V AP   I+    G++  D  G+  +  + L F A G  
Sbjct: 253 FIDESEENKRSTAQLISSSEYVDAPLSAIQPRFLGQYE-DGLGHAWLDAHPLRFFADGAV 311

Query: 341 NYPRPSQALWTYSQMVRWGQTSLSRQRVDAAISAYRPDLYREALGKDALPADADAGRLEG 400
           N P  S  +W  +Q  RWG           A   ++ D+YR A   +AL        +  
Sbjct: 312 NMPWLSDGIWFLTQFRRWGLLKEDPDYFGLARRIHQLDIYRTA--AEALGIAVPQQSMRR 369

Query: 401 ATDGDRFMDGHVFDPGRIEDYIKSF 425
           +T     +DG ++D      Y +SF
Sbjct: 370 ST----LLDGSIWDGSDPASYARSF 390