Pairwise Alignments

Query, 298 a.a., ABC transporter for L-Fucose, permease component 1 (from data) from Sinorhizobium meliloti 1021

Subject, 291 a.a., sugar ABC transporter permease from Variovorax sp. OAS795

 Score =  147 bits (371), Expect = 3e-40
 Identities = 80/269 (29%), Positives = 141/269 (52%), Gaps = 2/269 (0%)

Query: 9   PTLLLLPAFIVLAVFIVLPLIFSLYSSFTPFRLTKPDSLWVFIGFRNYVNVLTNAEFWVA 68
           P   L PA +++A   + P++ +    F  + +  P S   ++G  ++V+  +N   W +
Sbjct: 8   PAFYLGPAVLIMAAACLYPVVSAFQLGFFDWSMGTPWSEARWVGLDSFVSAFSNPRVWSS 67

Query: 69  FGRTVLLLTVALNAEMFLGLGLALLVNKATYGQRALRTAMMFPMMFSPVLVGFQFKFLFN 128
              T+    V++ AEM LG+ LAL + +   G    RT  + PMM +P+ VG  +++LF+
Sbjct: 68  LWTTLQFAAVSVTAEMVLGIALALALERPVRGTAFFRTLFILPMMIAPIAVGLAWRYLFD 127

Query: 129 DNIGFVNNALQSLGLTDRAIPWLIDGNLALFSIIVAEVWSSTAVFAILILAGLLAMPKDP 188
              G VN  L   G+  R   WL D  LA  +I+VA++W  T    I+++A L  +    
Sbjct: 128 AQFGLVNAVLALFGIAARG--WLADPTLAFAAIVVADIWQWTPFVFIMMVAALANVDGAV 185

Query: 189 VEAAHVDGCTPWQTFRYVTWPYLMPFAFIAMTIRSLDVARAYDIVKIMTDGGPAKRTELL 248
           +EA+ +DG   WQ    V  P +M    I + +R +D  R  +++ ++T GGP   TE+L
Sbjct: 186 IEASRIDGAKWWQMTFLVKLPMVMHVIAITLMMRLIDAFRVLEVIYVLTFGGPGDATEIL 245

Query: 249 WTLIGRTAYGDARMGMANAMAYVAILLSI 277
              I +TA+   ++G A A++ + +L+ +
Sbjct: 246 ALHIYKTAFVGQQLGAAAAISVLLLLVVV 274