Pairwise Alignments

Query, 298 a.a., ABC transporter for L-Fucose, permease component 1 (from data) from Sinorhizobium meliloti 1021

Subject, 310 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  146 bits (369), Expect = 5e-40
 Identities = 92/287 (32%), Positives = 141/287 (49%), Gaps = 3/287 (1%)

Query: 11  LLLLPAFIVLAVFIVLPLIFSLYSSFTPFRLTKPDSLWVFIGFRNYVNVLTNAEFWVAFG 70
           L +LPA + L  F+  PL   ++  FT  R+ +     VFIG  NY  +  ++ FW++  
Sbjct: 26  LFMLPAAVFLICFLTYPLGLGVWLGFTDTRIGRDG---VFIGIENYEFLARDSVFWLSVY 82

Query: 71  RTVLLLTVALNAEMFLGLGLALLVNKATYGQRALRTAMMFPMMFSPVLVGFQFKFLFNDN 130
            T+L   VA   +  LGL LALL+N+    +   R  ++ P +   VL    F ++++  
Sbjct: 83  NTLLYTFVASILKFVLGLWLALLLNENLPFKSFFRAIVLLPWVVPTVLSALAFWWIYDSQ 142

Query: 131 IGFVNNALQSLGLTDRAIPWLIDGNLALFSIIVAEVWSSTAVFAILILAGLLAMPKDPVE 190
              ++ +L  LG+ D  I +L D N A  S+I A VW      AI +LAGL  +P    E
Sbjct: 143 FSIISWSLMQLGIIDGPINFLGDPNNARASVIAANVWRGIPFVAISLLAGLQTIPASLQE 202

Query: 191 AAHVDGCTPWQTFRYVTWPYLMPFAFIAMTIRSLDVARAYDIVKIMTDGGPAKRTELLWT 250
           AA +DG T WQ FRYVT P L P   + MT   L     + ++ ++T GGP   T L+ T
Sbjct: 203 AASLDGATSWQRFRYVTLPMLTPIIAVVMTFSVLFTFTDFQLIYVLTKGGPVNATHLMAT 262

Query: 251 LIGRTAYGDARMGMANAMAYVAILLSIFFTVYFFRKLAAARQQIGAE 297
           L  +      ++G   A+A   I   +   ++ F  L   + Q G +
Sbjct: 263 LSFQRGIPGGQLGEGAAIAVAMIPFLLAAIMFSFFGLQRRKWQQGGQ 309