Pairwise Alignments

Query, 298 a.a., ABC transporter for L-Fucose, permease component 1 (from data) from Sinorhizobium meliloti 1021

Subject, 295 a.a., Maltose/maltodextrin ABC transporter, permease protein MalF from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  119 bits (298), Expect = 8e-32
 Identities = 72/239 (30%), Positives = 123/239 (51%), Gaps = 3/239 (1%)

Query: 46  SLWVFIGFRNYVNVLTNAEFWVAFGRTVLLLTVALNAEMFLGLGLALLVNKATYGQRALR 105
           S+  ++G  NY  +L++  FW A    +L   V + A++ LG+  ALL+++   G+  +R
Sbjct: 47  SIRTWVGLANYTRILSDETFWHALRVGLLFAVVTIAAQVVLGVLFALLLDQQFPGRPLVR 106

Query: 106 TAMMFPMMFSPVLVGFQFKFLFNDNIGFVNNALQSLGLTDRAIPWLIDGNLALFSIIVAE 165
              + P +   V+V   F++L +  +G      + LGL   A  W  +   A+  +I   
Sbjct: 107 GITVLPYLLPTVVVTVIFQWLLDGGLGLFTVWSEQLGLGRPA--WFENPTSAMLILIGVS 164

Query: 166 VWSSTAVFAILILAGLLAMPKDPVEAAHVDGCTPWQTFRYVTWPYLMPFAFIAMTIRSLD 225
           VW+ T    +  LA L  +PK   EAA VDG + W+ F ++T P L P   + + +RS+ 
Sbjct: 165 VWTWTPFVTVCFLAALQTVPKSLYEAARVDGASAWKRFWHITIPMLAPMLTVTVLLRSIW 224

Query: 226 VARAYDIVKIMTDGGPAKRTELLWTLIGRTAYGDARMGMANAMAYVA-ILLSIFFTVYF 283
           +   +D+V ++T GGP   TE L  L  R A+    +G    +A ++ +LL++   VYF
Sbjct: 225 MFNKFDVVWLLTKGGPLSATEHLPVLSYRRAFSQFDVGGGATVATLSFLLLTLLIAVYF 283