Pairwise Alignments

Query, 298 a.a., ABC transporter for L-Fucose, permease component 1 (from data) from Sinorhizobium meliloti 1021

Subject, 331 a.a., sugar ABC transporter permease from Serratia liquefaciens MT49

 Score =  156 bits (395), Expect = 5e-43
 Identities = 79/241 (32%), Positives = 139/241 (57%), Gaps = 10/241 (4%)

Query: 11  LLLLPAFIVLAVFIVLPLIFSLYSSFTPFRLTKPDSLWVFIGFRNYVN---------VLT 61
           LL+ PA ++LAV    PL+ +L+ SFT   L  PD  + F+GF NY++         VL 
Sbjct: 40  LLVAPAMLLLAVVAGWPLLRTLFYSFTDAMLDAPDD-YRFVGFANYLDLTEGGHHYGVLA 98

Query: 62  NAEFWVAFGRTVLLLTVALNAEMFLGLGLALLVNKATYGQRALRTAMMFPMMFSPVLVGF 121
           +  +W+A G T+    ++++ E+  G+ LALL+N+   GQ  +RTA++ P     ++   
Sbjct: 99  DPLWWLAVGNTLRFSLLSVSLELVFGMLLALLMNQKFRGQGLVRTAILVPWAIPTIVSAK 158

Query: 122 QFKFLFNDNIGFVNNALQSLGLTDRAIPWLIDGNLALFSIIVAEVWSSTAVFAILILAGL 181
            + ++F+D  G VN+ L   G+    + W+ +  L+++++++A+VW +T   A+++LA L
Sbjct: 159 MWGWMFHDQYGVVNDLLLKTGIIATPLAWVAEPGLSMWAVVIADVWKTTPFMALMLLAAL 218

Query: 182 LAMPKDPVEAAHVDGCTPWQTFRYVTWPYLMPFAFIAMTIRSLDVARAYDIVKIMTDGGP 241
             +P D  EAA +DG   WQ FR +T P +MP   +A+  R +D  R +D++ ++T    
Sbjct: 219 QLIPGDLYEAARIDGANAWQRFRRITLPLIMPAMIVALIFRVMDALRVFDLIYVLTSNSE 278

Query: 242 A 242
           A
Sbjct: 279 A 279