Pairwise Alignments

Query, 298 a.a., ABC transporter for L-Fucose, permease component 1 (from data) from Sinorhizobium meliloti 1021

Subject, 302 a.a., sugar ABC transporter permease from Serratia liquefaciens MT49

 Score =  146 bits (368), Expect = 7e-40
 Identities = 82/288 (28%), Positives = 149/288 (51%), Gaps = 1/288 (0%)

Query: 11  LLLLPAFIVLAVFIVLPLIFSLYSSFTPFRLTKPDSLWVFIGFRNYVNVLTNAEFWVAFG 70
           +LL P  +++ +    PL  +L+ SFT   L        ++G  N++  LT+ +F  A G
Sbjct: 14  VLLAPMLLMMLLLTAWPLGRTLWLSFTDAALVGDGVAPAWVGADNFLYALTDPDFQAALG 73

Query: 71  RTVLLLTVALNAEMFLGLGLALLVNKATYGQRALRTAMMFPMMFSPVLVGFQFKFLFNDN 130
           RT+    V++  E  +G+ +ALL+N+  +G+  LR  ++ P     ++    ++  FN +
Sbjct: 74  RTLYFTLVSVAFEGVIGVLVALLLNQKFHGRNLLRVLVILPWALPTIVNATMWRLNFNPD 133

Query: 131 IGFVNNALQSLGLTDRAIPWLIDGNLALFSIIVAEVWSSTAVFAILILAGLLAMPKDPVE 190
            G +N  L  LG+ D    WL D   AL ++++A++W +  +  +L LA L  +P D  E
Sbjct: 134 YGSINALLTQLGVIDHYRSWLGDPASALNAVMLADIWKNYPLITLLTLAALQTIPDDLYE 193

Query: 191 AAHVDGCTPWQTFRYVTWPYLMPFAFIAMTIRSLDVARAYDIVKIMTDGGPAKRTELLWT 250
           AA +DG + W+ FR +T P ++    +A+ +R++D  + +DI+ +MT GGP   T+ L  
Sbjct: 194 AARLDGASAWRRFRAITLPAILAPLAVALVLRTIDAFKVFDIIYVMTRGGPMDSTKTLSF 253

Query: 251 LIGRTAYGDARMGMANAMAYVAILL-SIFFTVYFFRKLAAARQQIGAE 297
            + + ++   R G   A A +  LL  +   +Y        R+ +  E
Sbjct: 254 FVYQESFSYLRAGSGAAYAVLMTLLCGVLIALYMLMLFRQRRRSLADE 301