Pairwise Alignments

Query, 298 a.a., ABC transporter for L-Fucose, permease component 1 (from data) from Sinorhizobium meliloti 1021

Subject, 302 a.a., sugar ABC transporter permease from Erwinia tracheiphila SCR3

 Score =  135 bits (340), Expect = 1e-36
 Identities = 76/273 (27%), Positives = 142/273 (52%), Gaps = 1/273 (0%)

Query: 11  LLLLPAFIVLAVFIVLPLIFSLYSSFTPFRLTKPDSLWVFIGFRNYVNVLTNAEFWVAFG 70
           +LL P  +++ +    PL+ ++  SFT   L        +IG  NY+  LT+ +F  +  
Sbjct: 14  VLLAPMLLMMGLLTTWPLLRTIRLSFTDAALISNGGTINYIGVENYLYALTDPDFLSSLL 73

Query: 71  RTVLLLTVALNAEMFLGLGLALLVNKATYGQRALRTAMMFPMMFSPVLVGFQFKFLFNDN 130
           RT+     ++  E  +G+ +ALL+N+  YG+  LR  ++ P     ++    ++  FN +
Sbjct: 74  RTLYFTVTSVALEGIIGVLVALLLNQKFYGRSVLRVLVILPWALPTIVNAMMWRLNFNPD 133

Query: 131 IGFVNNALQSLGLTDRAIPWLIDGNLALFSIIVAEVWSSTAVFAILILAGLLAMPKDPVE 190
            G +N  L  LG+      WL   + AL +++VA+VW +  +  +L+LA L ++P    E
Sbjct: 134 YGSINALLTQLGIIGNYRSWLGSPDSALNAVMVADVWKNYPLVTLLVLAALQSIPDHLFE 193

Query: 191 AAHVDGCTPWQTFRYVTWPYLMPFAFIAMTIRSLDVARAYDIVKIMTDGGPAKRTELLWT 250
           AA +DG +    FR + +P ++    +A+ +R++D  + +D++ +MT GGP   T+ L  
Sbjct: 194 AAMLDGASALHRFRAIIFPAIVGPLSVALVLRTIDAFKVFDVIYVMTRGGPVDSTKTLSF 253

Query: 251 LIGRTAYGDARMGMANAMAYVAILL-SIFFTVY 282
            + + ++   R G   A A +  L+ S+   VY
Sbjct: 254 YVYQESFSYLRAGSGAAYAILMTLMCSVLIAVY 286