Pairwise Alignments

Query, 298 a.a., ABC transporter for L-Fucose, permease component 1 (from data) from Sinorhizobium meliloti 1021

Subject, 315 a.a., sugar ABC transporter permease from Dickeya dadantii 3937

 Score =  141 bits (355), Expect = 2e-38
 Identities = 86/286 (30%), Positives = 146/286 (51%), Gaps = 15/286 (5%)

Query: 9   PTLLLLPAFIVLAVFIVLPLIFSLYSS--------FTPFRLTKPDSLWVFIGFRNYVNVL 60
           P LL+LP+F +L +F   PL+   + S              T+P     F+G  N++ V 
Sbjct: 30  PYLLILPSFGLLLLFTFYPLLQGFWMSVFQRGVVVLPQVASTQPK----FVGIDNFIQVF 85

Query: 61  TNAEFWVAFGRTVLLLTVALNAEMFLGLGLALLVNKATYGQRALRTAMMFPMMFSPVLVG 120
           T+ EF     RTV+ +  A+   + + L +ALL+     G    RT + FP M S + +G
Sbjct: 86  TDPEFQHVLLRTVVFVVFAVPLNLVIALCMALLLAPQMRGFGLARTIVFFPSMISLLTIG 145

Query: 121 FQFKFLFNDNIGFVNNALQSLGLTDRAIPWLIDGNLALFSIIVAEVWSSTAVFAILILAG 180
             +K+LF  N G +N  L  + ++   +PWL    +A  ++++  VW+S     +++LAG
Sbjct: 146 IMWKWLFGYNSGLINYVLSLVDISP--VPWLQQETMAQIAVVIVWVWASAGFNMMILLAG 203

Query: 181 LLAMPKDPVEAAHVDGCTPWQTFRYVTWPYLMPFAFIAMTIRSLDVARAYDIVKIMTDGG 240
           L A+P+D  EA+ +DG + W+TF  +T P L P   + + + S++  + Y++V  +T GG
Sbjct: 204 LTAIPEDLYEASRMDGTSRWRTFWRITLPLLQPSVVVVVVLSSIEAFKVYELVISLTGGG 263

Query: 241 PAKRTELLWTLIGRTAY-GDARMGMANAMAYVAILLSIFFTVYFFR 285
           P + T  L   I   A+   A  G+A A + V  ++    +V   R
Sbjct: 264 PGRATVYLIQTIYENAFMQPATAGVAAAQSVVLFVILFALSVIQLR 309