Pairwise Alignments

Query, 439 a.a., ABC transporter for L-Fucose, periplasmic substrate-binding protein (from data) from Sinorhizobium meliloti 1021

Subject, 577 a.a., Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 65.1 bits (157), Expect = 6e-15
 Identities = 86/356 (24%), Positives = 138/356 (38%), Gaps = 61/356 (17%)

Query: 135 KLVMLPRAQFDVSALYFQKSLYQDEAKKTEFKAKYGYDLAPPDTWAQVSDQAEFFA---- 190
           KL  LP  QF  +  +F+  L+  +  K +FKAKYGYDL  P  W+   D AEFF     
Sbjct: 177 KLYQLPDQQF-ANLYWFRADLFDRKDLKDKFKAKYGYDLGVPLNWSAYEDIAEFFTNDVK 235

Query: 191 ---APPNFYGTQFAGKEEAINGRFYEMLVAEGG--EYLDKDGRP---------------- 229
                P +    +  K+ ++  RF +  ++  G  +    +G+P                
Sbjct: 236 TIDGKPIYGHMDYGKKDPSLGWRFTDAWLSMAGTADIGIPNGKPVDEWGIRASADGCNPQ 295

Query: 230 --------AFNSDAGVRALEWFVKLYKDKAVPPGTTNYLWDDLGQGFASGSIAVNLDW-- 279
                   A NS A V AL  ++   K K  P   T   + + G   A G IA  + W  
Sbjct: 296 GASVSRGGATNSPAAVYALTKYIDWMK-KYAPKDATGMTFGEAGPVPAQGQIAQQIFWYT 354

Query: 280 --------PGWASFFND--PKSSKVAGNVGVKVQPAGSSGKRTGWSGHHGFSVTESCADK 329
                   PG      D  PK     G  G    P    G + G+     +S      + 
Sbjct: 355 AFTADMTKPGLPVVNADGTPKWRMAPGPNG----PYWKQGMQNGYQDVGSWSFFNGHDEN 410

Query: 330 EAAASLVW--WLTNEDSQKLESAAGPLPTRSAVWDFNIKAAEGDAYKTEVLQAFQEAAKH 387
           + AA+ ++  ++T + +   ++  G  P R +  D   KA    A K   L  F  +   
Sbjct: 411 KTAAAWLYAQFVTAKTTSLKKTIVGLTPIRES--DIQSKAMTDLAPKLGGLVEFYRSPAR 468

Query: 388 AFPVP---QTAEWIEISNAVYPELQAAILGDKTSKEALDAAAEKATGI---LEDAG 437
               P      ++ +++   +  +  A+ G+KT + A+D  AE+   +   LE AG
Sbjct: 469 VAWTPTGTNVPDYPKLAQLWWQNVAQAVTGEKTPQAAMDNLAEQMDQVMSRLERAG 524