Pairwise Alignments

Query, 636 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 544 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

 Score = 58.2 bits (139), Expect = 9e-13
 Identities = 76/286 (26%), Positives = 117/286 (40%), Gaps = 38/286 (13%)

Query: 74  ADWVHEIKLDGYRAQLHINGGKITLYTRTGLDWTTEFEAIATAAEDLAGHDVVMDGEVTV 133
           ADW  E K DG RAQL    G++ +++R     T  F  + +    L     V+DGE+ V
Sbjct: 233 ADWQVEWKWDGIRAQLVKREGRLWIWSRGEELVTERFPELHSLVSGLP-DGTVIDGEIVV 291

Query: 134 FGKTGLPDFQALRRELAKRSSPNLTFQ-------AFDLLHLDGYDLRRVPLIERKRVLRE 186
           +  T  P F  L++ + +++      +       A+DLL   G D R     ER+  L  
Sbjct: 292 WKDTVQP-FALLQQRIGRKTLSKKVLEDAPVAVLAYDLLEHQGDDWRNHTQAERRTQLER 350

Query: 187 LIGDAAGTIAYVDYL---ELEEGEPVYRHACK-MGLEGIVSKRKDAPYRSGRQE---IWT 239
           +I      +     L      E     R A + +G+EG++ K +D  Y  GR +   +W 
Sbjct: 351 VIAQCNQPVLVASALLTGATWEALAKQREASRSLGVEGMMLKARDGLYGVGRTKDMGVWW 410

Query: 240 KTKCTKRDAFPIVAFVEKLGAQPRRIASLY----LGRWEGD-----RLVYAGKAQTGYTL 290
           K K    D F + A +        R ASLY       W+G       LV   KA +G T 
Sbjct: 411 KWKV---DPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDGPPGSERTLVPFAKAYSGLTD 467

Query: 291 TAAREVRERLNPLIIGK-SPLSHPINKPKATWVEPQVYAEIDYGGV 335
              R+V   +    + K  P+S          V P +  E+ + G+
Sbjct: 468 EEMRKVDAIVRKTTVEKFGPVSS---------VTPSMVFELGFEGI 504