Pairwise Alignments

Query, 636 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 865 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  352 bits (903), Expect = e-101
 Identities = 225/619 (36%), Positives = 318/619 (51%), Gaps = 43/619 (6%)

Query: 32  AVGSRWTASPVDRLANLG--ATQSA---FPAFIEPCHPTLKKRPPDGADWVHEIKLDGYR 86
           ++ +   A  +    N G  AT+ A    PAF  P   TL  + P G  W++E K DGYR
Sbjct: 209 SISANLKAGAIAENGNAGKRATRKASGKLPAFKAPQLATLVTKVPAGDAWLNEAKFDGYR 268

Query: 87  AQLHINGGKITLYTRTGLDWTTEFEAIATAAEDLAGHDVVMDGEVTVFGKTGLPDFQALR 146
               +  G +  YTR GLDWT +F AIA A  +L     ++DGEV    + G   F AL+
Sbjct: 269 LVCAVGAGTVRCYTRNGLDWTEKFPAIAAALAELDCQSALIDGEVVALSEGG-STFSALQ 327

Query: 147 RELAKRSSPNLTFQAFDLLHLDGYDLRRVPLIERKRVLRELIGD--AAGTIAYVDYLELE 204
           + L   +S  L   AFDL+ LDG DL R PL+ERK  L  L+    A  T+ + +++   
Sbjct: 328 KALRTGASTRL--YAFDLIELDGKDLSRKPLVERKERLEALLQTLGATSTVQFSEHVR-G 384

Query: 205 EGEPVYRHACKMGLEGIVSKRKDAPYRSGRQEIWTKTKCTKRDAFPIVAFVEKLGAQPRR 264
            GE V    CK G EGI++K  DAPYRSGR   W K KCTKR  F I  +      + R 
Sbjct: 385 NGEHVLSAICKAGQEGIIAKEADAPYRSGRSRSWLKVKCTKRQEFVIGGYTPS-SKKGRA 443

Query: 265 IASLYLGRWEGDRLVYAGKAQTGYTLTAAREVRERLNPLIIGKSPL-SHPINKPK-ATWV 322
            ASL +G +EG +L+Y G   TG++     ++           SP  S P  + + + W+
Sbjct: 444 FASLLVGTFEGGKLIYRGGVGTGFSGKTMEDLAAAFAKRKRDTSPFDSVPRERMRNSVWL 503

Query: 323 EPQVYAEIDYGGVTDDGLLREPVFKGLQDVSRAAGKPKPTTAPASI-------------- 368
           EP + AE+D+   T DG +R   F+GL++   A      T  PA                
Sbjct: 504 EPDLVAEVDFAEFTADGHVRHGSFEGLREDKEARAVKLETPKPAEAEPETAKSKSSARTR 563

Query: 369 RVPP----ANIL--------QLLPEAVVPSKEELANYWTRVADRALHFLGGRPLKLVRHI 416
           + PP    A++L        ++L E    +K +LA Y+  VA+R L F    P+ LVR  
Sbjct: 564 KTPPVQGDADVLGIRISHPDRVLFEGQGITKIDLARYYAVVAERMLPFAADHPVSLVRCP 623

Query: 417 HGTT---FYHKGPLPPIPPEVHQLRIEKREGGAGVRLWVDDLAGLLGLVEIGAVELHPWA 473
            G     F+ K      P  + ++ I +  G     +++ D  GL+  V++G +E H W 
Sbjct: 624 QGGERHCFFQKHASDGFPEAIREVPITESSGDTENYMYIHDAKGLVAAVQMGTLEFHIWG 683

Query: 474 ASVDDIEHADALIFDLDPGEGVSWAFVVETALRLREFLEAEGFKTWPKLTGGKGVHLMSP 533
           +S+D +E  D L+FDLDP   V +  V   ALRLR+ L   G KT P +TGGKGVH++ P
Sbjct: 684 SSIDRLEKPDRLVFDLDPDPSVDFETVKAAALRLRDELAEIGLKTVPMVTGGKGVHVIVP 743

Query: 534 LPAKMTHNAAHAYAKRLAQQFASTDPDRYVTSAQLSRRPGKLFLDYLRNGRGTTAVGTYS 593
           L        A  +AK LA+  A  DPD +V +   ++R GK+F+D+LRN RG TA+  YS
Sbjct: 744 LRPHAEWEEAKGFAKALARSIAERDPDNFVATMSKAKRKGKIFIDWLRNDRGATAIAPYS 803

Query: 594 PRARSGFPVAAPVTWRDIE 612
            RARSG PVA PV W +++
Sbjct: 804 TRARSGGPVATPVGWDELQ 822