Pairwise Alignments

Query, 636 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 364 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  215 bits (548), Expect = 2e-60
 Identities = 124/298 (41%), Positives = 167/298 (56%), Gaps = 9/298 (3%)

Query: 56  PAFIEPCHPTLKKRPPDGADWVHEIKLDGYRAQLHINGGKITLYTRTGLDWTTEFEAIAT 115
           PA I+PC  +L  RPP G DW  E+K DGYR  +HI  G++ + TR G DWT  F  I  
Sbjct: 19  PARIDPCLASLVDRPPKGPDWAFEVKWDGYRIAVHIEPGRVRILTRGGYDWTERFPTIVD 78

Query: 116 AAEDLAGHDVVMDGEVTVFGKTGLPDFQALRRELAKRSSP----NLTFQAFDLLHLDGYD 171
            A  LA    ++DGE  V    G  DF  L+R L +  S      + F AFDLL+LDG+D
Sbjct: 79  DARRLAVKTAILDGEAVVLDDKGRSDFGMLQRALGRLPSAVEAGAIVFYAFDLLYLDGHD 138

Query: 172 LRRVPLIERKRVLRELIGDAAGTIAYVDYLELEEGEPVYRHACKMGLEGIVSKRKDAPYR 231
           LRR+PL ER+R+L  L+    G +   + L+  +G+  +R AC  GLEGI++K  + PYR
Sbjct: 139 LRRLPLRERRRLLEPLVAAREGAVRLSEELQ-ADGDEFFRVACAHGLEGIIAKHIEKPYR 197

Query: 232 SGRQEIWTKTKCTKRDAFPIVAFVEKLGAQPRRIASLYLGRWEGDRLVYAGKAQTGYTLT 291
           SGR E W K  C  RD+F IV F  +    P  +  L L   EGD  VY G   TG++  
Sbjct: 198 SGRGEWWQKITCKSRDSFVIVGF--EPSTVPGHLGRLLLAAREGDEPVYVGGCGTGWSNK 255

Query: 292 AAREVRERLNPLIIGKSPLSHPINKPKATWVEPQVYAEIDYGGVTDDGLLREPVFKGL 349
            +RE+R+ L  +   KSP +  + +  A  VEP   A+++Y   TDDG LR   FKG+
Sbjct: 256 LSRELRKLLEGMAT-KSP-AVDLRRRAAVSVEPVHVADVEYRAWTDDGKLRHASFKGI 311