Pairwise Alignments

Query, 636 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 552 a.a., putative DNA ligase, ATP-dependent from Pseudomonas putida KT2440

 Score = 58.5 bits (140), Expect = 7e-13
 Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 42/260 (16%)

Query: 70  PPDGADWVHEIKLDGYRAQLHINGGKITLYTRTGLDWTTEFEAIATAAEDLAGHDVVMDG 129
           PP  +DW  E K DG RAQ+    G++ +++R     T  F  +   A+ L    VV+DG
Sbjct: 231 PP--SDWQIEWKWDGIRAQVVKRDGQLWVWSRGEELVTERFPELHGLAQTLPD-GVVLDG 287

Query: 130 EVTVF--GKT----GLPDFQALRRELAKRS-------SPNLTFQAFDLLHLDGYDLRRVP 176
           E+ V+  G+T     +  F  L++ + +++          +  QA+DLL   G D R  P
Sbjct: 288 EILVWKPGETETELAVQPFALLQQRIGRKTLGKKLLNDAPVVLQAYDLLEWQGEDWRSRP 347

Query: 177 LIERKRVLRELIGD-------AAGTIAYVDYLELEEGEPVYRHACKMGLEGIVSKRKDAP 229
             ER+  L  L+ +        +  +   D+ +L       R    +G+EG++ K+++A 
Sbjct: 348 QHERRSQLEHLVDEHPLAPVLLSPLLQGPDWADLARQREQSR---SLGVEGLMLKQREAL 404

Query: 230 YRSGRQE---IWTKTKCTKRDAFPIVAFVEKLGAQPRRIASLY----LGRWE------GD 276
           Y  GR +   IW K K    D F + A +        R ASLY       W+      G 
Sbjct: 405 YGVGRTKDMGIWWKWKI---DPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDAPAGTPGR 461

Query: 277 RLVYAGKAQTGYTLTAAREV 296
            LV   KA +G +    R+V
Sbjct: 462 ALVPFAKAYSGLSDEEMRKV 481