Pairwise Alignments

Query, 636 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 353 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

 Score =  192 bits (489), Expect = 2e-53
 Identities = 115/306 (37%), Positives = 160/306 (52%), Gaps = 12/306 (3%)

Query: 56  PAFIEPCHPTLKKRPPDGADWVHEIKLDGYRAQLHINGGKITLYTRTGLDWTTEFEAIAT 115
           P  +EP    LK +PP G +W  E+K DGYR  +HI   +I + TR G DWT  F AI  
Sbjct: 39  PDRVEPALALLKAKPPTGNEWSWELKWDGYRLAVHIEPQRIRILTRGGHDWTHRFPAIEQ 98

Query: 116 AAEDLAGHDVVMDGEVTVFGKTGLPDFQALRREL------AKRSSPNLTFQAFDLLHLDG 169
           AA  L    +++DGE  V    G PDF  L++ L      A R + +    AFDL++LDG
Sbjct: 99  AARALGPATMIIDGEAVVLDDEGRPDFGLLQQSLGASGKQAGRRASHAVLYAFDLVYLDG 158

Query: 170 YDLRRVPLIERKRVLRELIGDAAGTIAYVDYLELEEGEP--VYRHACKMGLEGIVSKRKD 227
           +DLR V    R+ +L + I       + +   E  + EP  +  H C++GLEGIV KR D
Sbjct: 159 HDLRGVEYRSRRHLLEDTINGPTNEASAIRISETLDAEPAVLLEHVCRLGLEGIVGKRLD 218

Query: 228 APYRSGRQEIWTKTKCTKRDAFPIVAFVEKLGAQPRRIASLYLGRWEGDRLVYAGKAQTG 287
            PYRSGR   W K KC + +AF IV + E+  + P    SL L  +    LV+ G   TG
Sbjct: 219 QPYRSGRTGDWVKVKCIQSEAFFIVGY-ERSASYPAGFGSLALAAYRDGDLVHVGSVGTG 277

Query: 288 YTLTAAREVRERLNPLIIGKS--PLSHPINKPKATWVEPQVYAEIDYGGVTDDGLLREPV 345
           +       +R+ L+ L   +   PL H        WV+P + AEI++   T DG LR P 
Sbjct: 278 FKGAEIIRLRKILDTLRWKRKQPPLPHS-GTADIVWVQPTLIAEIEFRAWTSDGKLRHPS 336

Query: 346 FKGLQD 351
           +KGL++
Sbjct: 337 YKGLRE 342