Pairwise Alignments

Query, 636 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 345 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

 Score =  189 bits (480), Expect = 2e-52
 Identities = 113/301 (37%), Positives = 163/301 (54%), Gaps = 8/301 (2%)

Query: 56  PAFIEPCHPTLKKRPPDGADWVHEIKLDGYRAQLHINGGKITLYTRTGLDWTTEFEAIAT 115
           P  +EPC   LK  PP G DW +EIK DGYR  +HI    + + TR G DWT  F  IA 
Sbjct: 37  PDRVEPCLAMLKPVPPTGPDWAYEIKWDGYRLAVHIEPKGVRIITRGGHDWTHRFPTIAA 96

Query: 116 AAEDLAGHDVVMDGEVTVFGKTGLPDFQALRREL----AKRSSPNLTFQAFDLLHLDGYD 171
           AA+ L     ++DGE  V    G  DF AL+R L     KR+S      AFDLL+ DG+D
Sbjct: 97  AAKRLGIGTAILDGEAVVLNSEGRSDFGALQRSLGGRGGKRASSESILFAFDLLYFDGHD 156

Query: 172 LRRVPLIERKRVLRELIGDAAGTIAYVDYLELEEGEPVYRHACKMGLEGIVSKRKDAPYR 231
           L +  L  R+ +L +L+  A G I   + +   EG  +  +A  +GLEGI++K +D+PYR
Sbjct: 157 LTKTELSVRRHLLTDLLDGAVGAIQLSEEV-AGEGAELLENARSLGLEGIIAKHRDSPYR 215

Query: 232 SGRQEIWTKTKCTKRDAFPIVAFVEKLGAQPRRIASLYLGRWEGDRLVYAGKAQTGYTLT 291
            GR   W K KC + ++F IV + E+  A    + SL L        VY G   TG+   
Sbjct: 216 PGRTGDWLKIKCIQSESFMIVGY-EQSAAARGGVGSLLLAARRDHDWVYVGAVGTGFKEK 274

Query: 292 AAREVRERLNPLIIGKSPLSHPINKPKATWVEPQVYAEIDYGGVTDDGLLREPVFKGLQD 351
            A  +++ L+ L   ++P+  P+      + +P + AEI++ G TDDG LR   +KGL++
Sbjct: 275 DAAYLKKTLDTLKT-RTPVV-PLKGKNYVFAQPTLIAEIEFRGWTDDGNLRHASYKGLRE 332

Query: 352 V 352
           +
Sbjct: 333 I 333