Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 544 a.a., putative ABC transporter ATP-binding protein YejF from Xanthobacter sp. DMC5

 Score =  374 bits (960), Expect = e-108
 Identities = 229/557 (41%), Positives = 319/557 (57%), Gaps = 39/557 (7%)

Query: 6   VTTPLLRVENLGLRHVSGSATTPILS--DVSFELGRGEILGIIGESGAGKSTVGNAILGL 63
           +TTPLL V +L +    G    P L+   VSFEL +GE L ++GESG+GKS    ++L L
Sbjct: 1   MTTPLLSVRDLSVAFRRGDGAPPALAVKTVSFELAKGETLALVGESGSGKSVTALSVLKL 60

Query: 64  LS-PEFQQTSGTIEFDGKAIDGMTADERET--LRGRRISAIFQDHTASLDPLMSVGAQVE 120
           L  P     SG I F G+  D +T  ERE   +RG  I+ +FQ+  +SL+PL ++  QV 
Sbjct: 61  LPYPSASHPSGEILFKGR--DLLTVSERELRGIRGNNITMVFQEPMSSLNPLHTIERQVG 118

Query: 121 ETCLALDSSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSP 180
           E  L L   +S   ARAR ++LLA VGIP+PE R   YPHQ SGGQRQRV+IA+ALA  P
Sbjct: 119 EM-LILHRGMSAHAARARTLELLAEVGIPQPEERLSAYPHQLSGGQRQRVMIAMALANEP 177

Query: 181 DIIIADEPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQV 240
           D++IADEPT+ALD TVQ Q+L+LLK L    G++++ +THD+G++ +I +RV VM+KG++
Sbjct: 178 DLLIADEPTTALDVTVQAQILKLLKELQARLGMAMLFITHDLGIVRKIADRVCVMQKGEI 237

Query: 241 VEADRTTAILDQPRHDYTKKLLAAVPRLRIPTRTAKAEDNGRQADSPAIDSDQNPLLIAE 300
           VE          PRH YT+ LL A P+                   PA  +   PL++  
Sbjct: 238 VEQGGAEETFQHPRHPYTQALLKAEPK-----------------PDPAPIAPDAPLVMEA 280

Query: 301 GLSKQFAPQGFAWGIGRGKPR------FGLRDVGIRLARGSITGIVGESGSGKTTFGRIL 354
              K + P      I RG  R        +  V I + RG   G+VGESGSGKTT G  L
Sbjct: 281 NDLKVYFP------IKRGILRKTVGHVKAVDGVSIAIRRGETLGVVGESGSGKTTLGLAL 334

Query: 355 AGLDTAPTGRITIGEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRF 414
             L  +  G I     P D         L   +Q++FQDP  +L+PRM++ E + E +  
Sbjct: 335 LRL-ISSAGPIAFLGKPIDALSFKAMRPLRSDLQIVFQDPFGALSPRMSVAEIVGEGLLV 393

Query: 415 GAR-IRSGEEPADLAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADE 473
             R + + E  A + A +  +GL      R+PH+ SGGQ+QR+ IARA+   P  +V DE
Sbjct: 394 HQRQLSADERDARVVAALADVGLDPETRHRYPHEFSGGQRQRISIARAMALEPSFVVLDE 453

Query: 474 PTSALDVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTE 533
           PTSALD+ VQA+IV LL+    +R +T +FISHDL +V A+ S + + ++G++ + GP  
Sbjct: 454 PTSALDMIVQAQIVDLLRALQKKRDLTFMFISHDLRVVSALASRILVMRNGKMVEEGPAH 513

Query: 534 FIFSRSDNPYTRALINA 550
            +F      YTRAL  A
Sbjct: 514 DVFEHPKEDYTRALFAA 530



 Score =  152 bits (383), Expect = 4e-41
 Identities = 91/242 (37%), Positives = 134/242 (55%), Gaps = 8/242 (3%)

Query: 320 PRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTGRITIGEHPFD------ 373
           P   ++ V   LA+G    +VGESGSGK+     +  L   P+     GE  F       
Sbjct: 23  PALAVKTVSFELAKGETLALVGESGSGKSVTALSVLKLLPYPSASHPSGEILFKGRDLLT 82

Query: 374 VSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGEEPADLAAMMDR 433
           VS+   R      + M+FQ+P  SLNP  TI   + E +     + +    A    ++  
Sbjct: 83  VSERELRGIRGNNITMVFQEPMSSLNPLHTIERQVGEMLILHRGMSAHAARARTLELLAE 142

Query: 434 LGLPR--SLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEIVQLLK 491
           +G+P+    L  +PHQLSGGQ+QRV IA AL   P++++ADEPT+ALDV+VQA+I++LLK
Sbjct: 143 VGIPQPEERLSAYPHQLSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILKLLK 202

Query: 492 DTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRALINAR 551
           +  A   M M+FI+HDL IV+ +   V + + G I + G  E  F    +PYT+AL+ A 
Sbjct: 203 ELQARLGMAMLFITHDLGIVRKIADRVCVMQKGEIVEQGGAEETFQHPRHPYTQALLKAE 262

Query: 552 PQ 553
           P+
Sbjct: 263 PK 264