Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 540 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  389 bits (1000), Expect = e-112
 Identities = 214/551 (38%), Positives = 336/551 (60%), Gaps = 31/551 (5%)

Query: 7   TTPLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLSP 66
           T+ LL+V  L L    G A   ++  +SF++  GE++GI+GESG+GK+    +++GL  P
Sbjct: 6   TSSLLQVSGLTLALADGKA---LVHGISFDIAPGEMIGIVGESGSGKTLAARSLIGLAPP 62

Query: 67  EFQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLAL 126
              +T+G+I FDG+ +  ++A     LRG RI  +FQ+   SL+P M++G Q++E  LAL
Sbjct: 63  AVHRTAGSIVFDGQEVTALSAGALRKLRGSRIGMVFQEPMTSLNPSMAIGRQLDEG-LAL 121

Query: 127 DSSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIAD 186
            ++LS  + RAR +++L RV I +P      YPH+FSGG RQR+++A A+   P ++IAD
Sbjct: 122 HTTLSPAQRRARILEMLERVRIQDPAAALSAYPHRFSGGMRQRIMLASAMLLRPSLLIAD 181

Query: 187 EPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEADRT 246
           EPT+ALDA VQ++V++L+  L  + G ++++++HD+ +++  T+R++VM  G++VE++RT
Sbjct: 182 EPTTALDAVVQREVMDLMVELTRDHGTAVLMISHDLPMVARYTDRMVVMHHGRIVESNRT 241

Query: 247 TAILDQPRHDYTKKLLAAVPRLRIPTRTAKAEDNGRQADSPAIDSDQNPLLIAEGLSKQF 306
            A++  PR DYT+KLLAA+P  R P R                     P+L  +GL   F
Sbjct: 242 AALVSAPREDYTRKLLAAMPT-RGPVREIP---------------QAAPILEVDGLVLDF 285

Query: 307 APQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTGRIT 366
              G    + +  P+  L+ + +R+A G +  +VG SGSGKTT GR +AGL     GRI 
Sbjct: 286 PAGGGL--LSKRPPKRALKGIDLRIAPGEVVALVGGSGSGKTTLGRAIAGLLQPSGGRIL 343

Query: 367 IGEHPFDVSQSGRRSGLLGRV----QMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGE 422
                F+     RRS    R     QM+FQDP+ SL+PRMT+G ++ E++     +    
Sbjct: 344 -----FEGKGIARRSEGWARYRAQCQMVFQDPASSLDPRMTVGASIGEALTGMPGLTPAA 398

Query: 423 EPADLAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSV 482
               +  ++  + LP  +  R+PH+LSGGQ+QRV IARA++ RP  IVADEP SALDV+V
Sbjct: 399 RRGRILEVLQEVSLPAEVASRYPHELSGGQRQRVAIARAVVRRPAFIVADEPVSALDVTV 458

Query: 483 QAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNP 542
           +A+I++L     +    + +FISHDLA+V+ +   V + + G I + GP + +F R  + 
Sbjct: 459 RAQILELFAQLQSRHGFSCLFISHDLAVVEQIADRVIVMRHGEIVEQGPRDEVFDRPHHD 518

Query: 543 YTRALINARPQ 553
           YTR L+ A P+
Sbjct: 519 YTRELLAAAPR 529



 Score =  180 bits (457), Expect = 1e-49
 Identities = 104/266 (39%), Positives = 149/266 (56%), Gaps = 15/266 (5%)

Query: 9   PLLRVENLGLRHVSGSATTP------ILSDVSFELGRGEILGIIGESGAGKSTVGNAILG 62
           P+L V+ L L   +G            L  +   +  GE++ ++G SG+GK+T+G AI G
Sbjct: 274 PILEVDGLVLDFPAGGGLLSKRPPKRALKGIDLRIAPGEVVALVGGSGSGKTTLGRAIAG 333

Query: 63  LLSPEFQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEET 122
           LL P    + G I F+GK I      E       +   +FQD  +SLDP M+VGA + E 
Sbjct: 334 LLQP----SGGRILFEGKGI--ARRSEGWARYRAQCQMVFQDPASSLDPRMTVGASIGEA 387

Query: 123 CLALDSSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDI 182
              +   L+    R R +++L  V +P        YPH+ SGGQRQRV IA A+   P  
Sbjct: 388 LTGMPG-LTPAARRGRILEVLQEVSLPAEVAS--RYPHELSGGQRQRVAIARAVVRRPAF 444

Query: 183 IIADEPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVE 242
           I+ADEP SALD TV+ Q+LEL   L    G S + ++HD+ V+ +I +RV+VMR G++VE
Sbjct: 445 IVADEPVSALDVTVRAQILELFAQLQSRHGFSCLFISHDLAVVEQIADRVIVMRHGEIVE 504

Query: 243 ADRTTAILDQPRHDYTKKLLAAVPRL 268
                 + D+P HDYT++LLAA PR+
Sbjct: 505 QGPRDEVFDRPHHDYTRELLAAAPRM 530



 Score =  148 bits (374), Expect = 5e-40
 Identities = 87/236 (36%), Positives = 127/236 (53%), Gaps = 9/236 (3%)

Query: 327 VGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTGRITIGEHPFDVSQ-----SGRRS 381
           +   +A G + GIVGESGSGKT   R L GL   P    T G   FD  +     +G   
Sbjct: 29  ISFDIAPGEMIGIVGESGSGKTLAARSLIGL-APPAVHRTAGSIVFDGQEVTALSAGALR 87

Query: 382 GLLG-RVQMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGEEPADLAAMMDRLGL--PR 438
            L G R+ M+FQ+P  SLNP M IG  LDE +     +   +  A +  M++R+ +  P 
Sbjct: 88  KLRGSRIGMVFQEPMTSLNPSMAIGRQLDEGLALHTTLSPAQRRARILEMLERVRIQDPA 147

Query: 439 SLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEIVQLLKDTIAERA 498
           + L  +PH+ SGG +QR+ +A A+L RP +++ADEPT+ALD  VQ E++ L+ +   +  
Sbjct: 148 AALSAYPHRFSGGMRQRIMLASAMLLRPSLLIADEPTTALDAVVQREVMDLMVELTRDHG 207

Query: 499 MTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRALINARPQR 554
             ++ ISHDL +V      + +   GRI +   T  + S     YTR L+ A P R
Sbjct: 208 TAVLMISHDLPMVARYTDRMVVMHHGRIVESNRTAALVSAPREDYTRKLLAAMPTR 263