Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 556 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  364 bits (935), Expect = e-105
 Identities = 205/545 (37%), Positives = 315/545 (57%), Gaps = 21/545 (3%)

Query: 8   TPLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLSPE 67
           TPL+ VE L L    G     I+ +VSF++  GE++GI+GESG+GK+    AI+GL  P 
Sbjct: 9   TPLVSVEGLTL--AVGMGGREIVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPP 66

Query: 68  FQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLALD 127
             +T+G I F+G+ +          LRG R+  +FQ+   SL+P M++G Q+ E      
Sbjct: 67  LVRTAGRILFEGEDLTQAKPARLRELRGARVGMVFQEPMTSLNPSMTIGKQLVEALALHR 126

Query: 128 SSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIADE 187
             LS    R R +D+LARVGI +P+     +PH+FSGG RQR+++A  +   P ++IADE
Sbjct: 127 RDLSPAARRERILDMLARVGIRDPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLIADE 186

Query: 188 PTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEADRTT 247
           PT+ALDA VQ+ VLEL+  L  E   ++++++HD+ +++  T R++VMR G+V+E  RT 
Sbjct: 187 PTTALDAVVQRDVLELMVGLTREHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETGRTD 246

Query: 248 AILDQPRHDYTKKLLAAVPRLRIPTRTAKAEDNGRQADSPAIDSDQNPLLIAEGLSKQFA 307
            +L+QPRH YT++LL A+P  R+P R                  D+ P++    L   +A
Sbjct: 247 DMLEQPRHAYTRELLQAMPH-RLPARQV---------------PDEAPVVEVRNLVVDYA 290

Query: 308 PQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTGRITI 367
             G      +  P+  L  + + +    +  +VG SGSGKTT GR +AGL     G I  
Sbjct: 291 --GHRRLFAKTVPKRALHGIDLVVRPREVVAVVGGSGSGKTTLGRTIAGLLQPSGGEIMF 348

Query: 368 GEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGEEPADL 427
              P   S +G     L + QM+FQDP  SL+PRMTIG+ + E +R    + + +    +
Sbjct: 349 RGRPILRSDAGWSDYRL-QCQMVFQDPYASLDPRMTIGQLVGEGLRLVKGMSTADRARRV 407

Query: 428 AAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEIV 487
             +++ +GL      R+ H+LSGGQ+QRV IARA++ RP  ++ADEP SALDV+V+A+++
Sbjct: 408 QEVLEEVGLGTGFAPRYAHELSGGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVL 467

Query: 488 QLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRAL 547
            L  +       + +FISHDL +V+ +   V + +DGRI + G  + +F      YTR L
Sbjct: 468 ALFAELQKRHGFSCLFISHDLGVVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQDYTRKL 527

Query: 548 INARP 552
           ++A P
Sbjct: 528 LSAIP 532



 Score =  156 bits (395), Expect = 2e-42
 Identities = 92/228 (40%), Positives = 133/228 (58%), Gaps = 9/228 (3%)

Query: 41  EILGIIGESGAGKSTVGNAILGLLSPEFQQTSGTIEFDGKAIDGMTADERETLRGRRISA 100
           E++ ++G SG+GK+T+G  I GLL P    + G I F G+ I  + +D   +    +   
Sbjct: 316 EVVAVVGGSGSGKTTLGRTIAGLLQP----SGGEIMFRGRPI--LRSDAGWSDYRLQCQM 369

Query: 101 IFQDHTASLDPLMSVGAQVEETCLALDSSLSRREARARAIDLLARVGIPEPERRYRNYPH 160
           +FQD  ASLDP M++G  V E  L L   +S  +   R  ++L  VG+         Y H
Sbjct: 370 VFQDPYASLDPRMTIGQLVGEG-LRLVKGMSTADRARRVQEVLEEVGLGTGFAP--RYAH 426

Query: 161 QFSGGQRQRVVIAIALAGSPDIIIADEPTSALDATVQKQVLELLKILVDETGVSIILVTH 220
           + SGGQRQRV IA A+   P  +IADEP SALD TV+ QVL L   L    G S + ++H
Sbjct: 427 ELSGGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRHGFSCLFISH 486

Query: 221 DMGVISEITNRVLVMRKGQVVEADRTTAILDQPRHDYTKKLLAAVPRL 268
           D+GV+ ++ +RV+VM+ G++VE      + D P  DYT+KLL+A+P L
Sbjct: 487 DLGVVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQDYTRKLLSAIPAL 534



 Score =  147 bits (372), Expect = 8e-40
 Identities = 89/254 (35%), Positives = 136/254 (53%), Gaps = 9/254 (3%)

Query: 309 QGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAP----TGR 364
           +G    +G G     +R+V   +A G + GIVGESGSGKT   R + GL   P     GR
Sbjct: 15  EGLTLAVGMGGREI-VRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVRTAGR 73

Query: 365 ITIGEHPFDVSQSGRRSGLLG-RVQMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGEE 423
           I         ++  R   L G RV M+FQ+P  SLNP MTIG+ L E++    R  S   
Sbjct: 74  ILFEGEDLTQAKPARLRELRGARVGMVFQEPMTSLNPSMTIGKQLVEALALHRRDLSPAA 133

Query: 424 PAD-LAAMMDRLGL--PRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDV 480
             + +  M+ R+G+  P+  L   PH+ SGG +QR+ +A  +L  P +++ADEPT+ALD 
Sbjct: 134 RRERILDMLARVGIRDPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLIADEPTTALDA 193

Query: 481 SVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSD 540
            VQ ++++L+     E    ++ ISHDL +V      + + + G + + G T+ +  +  
Sbjct: 194 VVQRDVLELMVGLTREHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETGRTDDMLEQPR 253

Query: 541 NPYTRALINARPQR 554
           + YTR L+ A P R
Sbjct: 254 HAYTRELLQAMPHR 267