Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 593 a.a., peptide transport ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  363 bits (932), Expect = e-104
 Identities = 220/553 (39%), Positives = 331/553 (59%), Gaps = 12/553 (2%)

Query: 6   VTTPLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLL- 64
           +T+ LL V++L ++  + +    ++  +SF+L  G  L + GESG+GKS    +++ LL 
Sbjct: 1   MTSSLLSVKDLTVQVATPTGPKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQLLP 60

Query: 65  SPEFQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCL 124
            P  +   G+   DG+ I  +       +RGR+I  IFQ+   SL+P+M+VG Q+     
Sbjct: 61  KPMARIAGGSATLDGEDILALPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQLIGAIT 120

Query: 125 ALDSSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIII 184
           A  ++  RR ARARA +LL +V IPEPERR   YPH+ SGG RQR+VIA+ALA +P I+I
Sbjct: 121 AHGNTSGRRAARARAAELLDQVQIPEPERRLGQYPHELSGGLRQRIVIAMALAQNPKILI 180

Query: 185 ADEPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEAD 244
           ADEPT+ALD TVQ Q+L L++ L  + G+S+I++THDMGV++E+ + VLVM+ G+ VE  
Sbjct: 181 ADEPTTALDVTVQAQILALIRKLQADHGISVIMITHDMGVVAEMADEVLVMKHGRTVEHA 240

Query: 245 RTTAILDQPRHDYTKKLLAAVPRL--RIPTRTAKAEDNGRQADSPAIDSDQNPLLIAEGL 302
            +  +   P+  YTK+LL+AVPRL     T T K    G+  ++ +    + P+L  E L
Sbjct: 241 TSRDLFAHPQDAYTKELLSAVPRLGEMAGTETPK-RAAGKAVEAGSEPGAEQPMLQVENL 299

Query: 303 SKQFAPQGFAWGIGRGKPR--FGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTA 360
           + +F  +G   GI +   R    +  + + + RG    +VGESG GK+T G+ L  L   
Sbjct: 300 TVRFDIKG---GILQRPVRRLHAVEGISLSVRRGETLSLVGESGCGKSTTGKALLNL-VP 355

Query: 361 PTGRITIGEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRFGARIRS 420
            TG I +        +      +L  VQMIFQDP  SL+PRM +G+ + E +     + S
Sbjct: 356 WTGDIRVDGRSTRGLRGSTMRPILRDVQMIFQDPYASLDPRMRVGDLVAEPLVIHG-LAS 414

Query: 421 GEEPAD-LAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALD 479
           G E  D +  +  R+GL    + R+PH+ SGGQ+QR+CIARAL   P++IVADE  +ALD
Sbjct: 415 GSELRDRVEYLFKRVGLSPEQMKRYPHEFSGGQRQRICIARALSLSPKLIVADESVAALD 474

Query: 480 VSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRS 539
           VS+QA+++ LL+D   E  ++ +FISHD+A+V+ +   V +   GR  + G    IF   
Sbjct: 475 VSIQAQVLDLLQDIQDETGVSYLFISHDMAVVEQISHRVAVMYMGRFVEMGTRRQIFESP 534

Query: 540 DNPYTRALINARP 552
            +PYT+ L+ A P
Sbjct: 535 QHPYTKKLMAAVP 547



 Score =  139 bits (349), Expect = 4e-37
 Identities = 87/250 (34%), Positives = 135/250 (54%), Gaps = 23/250 (9%)

Query: 320 PRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTGRITIGEHPFDVSQ--- 376
           P+  +  +   L  G    + GESGSGK+     L  L   P  RI  G    D      
Sbjct: 21  PKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQLLPKPMARIAGGSATLDGEDILA 80

Query: 377 --SGRRSGLLGR-VQMIFQDPSVSLNPRMTIGETLDESI--------RFGARIRSGEEPA 425
               R   + GR + MIFQ+P  SLNP MT+G  L  +I        R  AR R+ E   
Sbjct: 81  LPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQLIGAITAHGNTSGRRAARARAAE--- 137

Query: 426 DLAAMMDRLGLPRS--LLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQ 483
               ++D++ +P     LG++PH+LSGG +QR+ IA AL   P+I++ADEPT+ALDV+VQ
Sbjct: 138 ----LLDQVQIPEPERRLGQYPHELSGGLRQRIVIAMALAQNPKILIADEPTTALDVTVQ 193

Query: 484 AEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPY 543
           A+I+ L++   A+  ++++ I+HD+ +V  M   V + K GR  +   +  +F+   + Y
Sbjct: 194 AQILALIRKLQADHGISVIMITHDMGVVAEMADEVLVMKHGRTVEHATSRDLFAHPQDAY 253

Query: 544 TRALINARPQ 553
           T+ L++A P+
Sbjct: 254 TKELLSAVPR 263