Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 542 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  378 bits (971), Expect = e-109
 Identities = 219/548 (39%), Positives = 326/548 (59%), Gaps = 23/548 (4%)

Query: 6   VTTPLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLS 65
           +T  LL V +L +    G  T+  +  +SF++ RGE + ++GESG+GKS   N+IL LL 
Sbjct: 1   MTDTLLSVRDLSVAFHQGGETSLAVDRISFDIKRGETVALVGESGSGKSVSANSILKLLP 60

Query: 66  -PEFQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCL 124
            P     SG I F+GK +   + DE   +RG  ++ IFQ+   SL+PL ++  Q+ E  L
Sbjct: 61  YPAASHPSGEILFNGKDLLKASDDELRHVRGNDVTMIFQEPMTSLNPLHTIEQQIGEI-L 119

Query: 125 ALDSSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIII 184
            +   L    ARAR ++LL +VGI E E+R   YPHQ SGGQRQRV+IA+ALA  P+++I
Sbjct: 120 EIHQDLKGAAARARTLELLEQVGIREAEKRLGAYPHQLSGGQRQRVMIAMALANRPELLI 179

Query: 185 ADEPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEAD 244
           ADEPT+ALD TVQ Q+LELLK L DE G+S++ +THD+G++ +I +RV VM KG++VE  
Sbjct: 180 ADEPTTALDVTVQAQILELLKSLKDEHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETG 239

Query: 245 RTTAILDQPRHDYTKKLLAAVPRLRIPTRTAKAEDNGRQADSPAIDSDQNPLLIAEGLSK 304
            T  I   P+H YT+ LLA+ PR                 + P  D+ +  ++ A+ +  
Sbjct: 240 PTAEIFANPQHAYTRHLLASEPR----------------GEPPPSDASRPIVIEAKDMKV 283

Query: 305 QF-APQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTG 363
            F    GF   +        +  + + L  G   G+VGESGSGKTT G  L  L  +  G
Sbjct: 284 WFPIKAGFLRRVVDHVK--AVDGIDLTLRAGQTLGVVGESGSGKTTLGLALTRL-ISSKG 340

Query: 364 RITIGEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRFGAR-IRSGE 422
           RI       D         L  R+Q++FQDP  SL+PRM+I + + E ++   + +  GE
Sbjct: 341 RIAFVGEDIDAYSFREMRPLRNRMQVVFQDPYGSLSPRMSIADIIGEGLKIHEKALTDGE 400

Query: 423 EPADLAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSV 482
               +AA ++ +GL  +   R+PH+ SGGQ+QR+ IARA++ +P+ ++ DEPTSALD+SV
Sbjct: 401 RDQRVAAALEEVGLDPATRWRYPHEFSGGQRQRIAIARAMVLKPQFVMLDEPTSALDMSV 460

Query: 483 QAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNP 542
           QA++V LL+D   +  +  +FISHDL +V+A+ + V + + G++ + GP E IF      
Sbjct: 461 QAQVVDLLRDLQRKHNLAYLFISHDLRVVRALANEVIVMRLGKVVEQGPAERIFEAPTED 520

Query: 543 YTRALINA 550
           YT+AL+ A
Sbjct: 521 YTKALMAA 528



 Score =  156 bits (395), Expect = 2e-42
 Identities = 92/244 (37%), Positives = 136/244 (55%), Gaps = 8/244 (3%)

Query: 318 GKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTGRITIGEHPFD---- 373
           G+    +  +   + RG    +VGESGSGK+     +  L   P      GE  F+    
Sbjct: 19  GETSLAVDRISFDIKRGETVALVGESGSGKSVSANSILKLLPYPAASHPSGEILFNGKDL 78

Query: 374 --VSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGEEPADLAAMM 431
              S    R      V MIFQ+P  SLNP  TI + + E +     ++     A    ++
Sbjct: 79  LKASDDELRHVRGNDVTMIFQEPMTSLNPLHTIEQQIGEILEIHQDLKGAAARARTLELL 138

Query: 432 DRLGLPRS--LLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEIVQL 489
           +++G+  +   LG +PHQLSGGQ+QRV IA AL  RPE+++ADEPT+ALDV+VQA+I++L
Sbjct: 139 EQVGIREAEKRLGAYPHQLSGGQRQRVMIAMALANRPELLIADEPTTALDVTVQAQILEL 198

Query: 490 LKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRALIN 549
           LK    E  M+M+FI+HDL IV+ +   V +   G+I + GPT  IF+   + YTR L+ 
Sbjct: 199 LKSLKDEHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETGPTAEIFANPQHAYTRHLLA 258

Query: 550 ARPQ 553
           + P+
Sbjct: 259 SEPR 262