Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 550 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  369 bits (948), Expect = e-106
 Identities = 213/546 (39%), Positives = 321/546 (58%), Gaps = 13/546 (2%)

Query: 7   TTPLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLSP 66
           TTP+L +E++ + +        ++  VSF +  GE++ ++GESG+GK+T   A++GLL+ 
Sbjct: 12  TTPVLELEDVAIAYRDDDGERTVVEGVSFAIQPGEVVALVGESGSGKTTTAQAVIGLLAD 71

Query: 67  EFQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLAL 126
             + T G I  +G  I   +    +++RGR +S + QD  +SL+P+ ++G QV+E  L L
Sbjct: 72  NGRLTRGAIRLNGADISRWSQPRLDSIRGRVVSLVPQDPGSSLNPVKTIGEQVDEI-LRL 130

Query: 127 DSSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIAD 186
                RR  R + + LL RVG+ EPE R   YPH+ SGG +QRV+IAIA+A  P +IIAD
Sbjct: 131 HQKSDRRRLRRQTLALLTRVGLTEPELRAGQYPHELSGGMKQRVLIAIAIALKPALIIAD 190

Query: 187 EPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEADRT 246
           EPTSALD TVQK++L+LL  L  E G +I+ VTHD+ V +E  +R+LV +KG + E   T
Sbjct: 191 EPTSALDVTVQKRILDLLDELRRENGTAILFVTHDLAVAAERADRLLVFQKGYIQEQGPT 250

Query: 247 TAILDQPRHDYTKKLLAAVPRLRIPTRTAKAEDNGRQADSPAIDSDQNPLLIAEGLSKQF 306
             +L  P+  Y + LLA +P L    R ++A+     +D P       P++  E L ++F
Sbjct: 251 RQVLSAPQSQYARTLLANIPSLAPARRPSRAD----ASDQPIF---SQPIVQVEQLVQEF 303

Query: 307 APQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTGRIT 366
              G      R +P   +  V   +A G+   IVGESGSGKTT  R++ G      GRI 
Sbjct: 304 PLTG-----SRKQPFRAVDAVSFSVAPGTTHAIVGESGSGKTTTARMILGFQRPTAGRIL 358

Query: 367 IGEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGEEPAD 426
           I        +          +Q+++Q+P  SL+P   + + ++E +R   R    E    
Sbjct: 359 IDGTDITQLRGEALRQFRQTIQLVYQNPFSSLDPSQRLFDIVEEPLRNFNRYTRTERANR 418

Query: 427 LAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEI 486
           +  + +R+ LP SLL R P +LSGGQ+QRV IARAL+  P+++V DE  SALDV+VQA+I
Sbjct: 419 VHEIFERVALPASLLQRRPAELSGGQRQRVAIARALVLEPKVLVLDEAVSALDVTVQAQI 478

Query: 487 VQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRA 546
           ++LL++  A   +T +FISHDLA+V+ +  +V +   G+  + GP E IF+R    YTR 
Sbjct: 479 LRLLEELQASLGLTYLFISHDLAVVRQIADTVSVLYHGKQVESGPVEQIFARPAERYTRE 538

Query: 547 LINARP 552
           LI+A P
Sbjct: 539 LIDAIP 544



 Score =  135 bits (341), Expect = 3e-36
 Identities = 93/264 (35%), Positives = 141/264 (53%), Gaps = 11/264 (4%)

Query: 9   PLLRVENLGLRH-VSGSATTPI--LSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLS 65
           P+++VE L     ++GS   P   +  VSF +  G    I+GESG+GK+T    ILG   
Sbjct: 292 PIVQVEQLVQEFPLTGSRKQPFRAVDAVSFSVAPGTTHAIVGESGSGKTTTARMILGFQR 351

Query: 66  PEFQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLA 125
           P    T+G I  DG  I  +  +     R + I  ++Q+  +SLDP   +   VEE  L 
Sbjct: 352 P----TAGRILIDGTDITQLRGEALRQFR-QTIQLVYQNPFSSLDPSQRLFDIVEEP-LR 405

Query: 126 LDSSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIA 185
             +  +R E   R  ++  RV +P    + R  P + SGGQRQRV IA AL   P +++ 
Sbjct: 406 NFNRYTRTERANRVHEIFERVALPASLLQRR--PAELSGGQRQRVAIARALVLEPKVLVL 463

Query: 186 DEPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEADR 245
           DE  SALD TVQ Q+L LL+ L    G++ + ++HD+ V+ +I + V V+  G+ VE+  
Sbjct: 464 DEAVSALDVTVQAQILRLLEELQASLGLTYLFISHDLAVVRQIADTVSVLYHGKQVESGP 523

Query: 246 TTAILDQPRHDYTKKLLAAVPRLR 269
              I  +P   YT++L+ A+P  R
Sbjct: 524 VEQIFARPAERYTRELIDAIPGQR 547