Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  376 bits (965), Expect = e-108
 Identities = 220/544 (40%), Positives = 321/544 (59%), Gaps = 33/544 (6%)

Query: 10  LLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLS-PEF 68
           LL V NL +   + + T   + ++S+ + RGE L I+GESG+GKS   +AI+ L+  P  
Sbjct: 5   LLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLIDMPPG 64

Query: 69  QQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLALDS 128
           + +SG I  +GK +  M+AD+R  + GR I+ IFQD  + L+P+ +VG Q+ E       
Sbjct: 65  KISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALRT--H 122

Query: 129 SLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIADEP 188
            +  R+A+  A+ L  RV +PEPE+    YPH+FSGGQRQRV+IA+ALA  P+++IADEP
Sbjct: 123 GIDNRQAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIADEP 182

Query: 189 TSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEADRTTA 248
           T+ALD TVQ +VL LLK L  ETG+ ++++THD+GV+SE+ +RV+VM KG +VE+     
Sbjct: 183 TTALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGTVRE 242

Query: 249 ILDQPRHDYTKKLLAAVPRLRIPTRTAKAEDNGRQADSPAIDSDQNPLLIAEGLSKQFAP 308
           +   P+H YTKKL+AA P                Q   P+ D +  P+L      K +  
Sbjct: 243 VYRNPQHPYTKKLIAAAP-------------GKGQLHEPSTDGE--PILKVRNARKSYG- 286

Query: 309 QGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTGRI-TI 367
            GF            L+ +   L  G    +VGESGSGK+T  RIL  LD   +G     
Sbjct: 287 -GFE----------ALKGISFDLKAGETVAVVGESGSGKSTLARILLRLDDPDSGTAHWK 335

Query: 368 GEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDES-IRFGARIRSGEEPAD 426
           G+  F +S S     L   +QM+FQDP+ SLNPRMT+ + + E+ +     +   +  A 
Sbjct: 336 GQDLFTLSPS-ELFKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPEILPKAKWRAR 394

Query: 427 LAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEI 486
            A +++R+GL    +GR+PHQ SGGQ+QR+ IARAL   P++IV DE  SALDVSVQA++
Sbjct: 395 AAELLERVGLSPEHMGRYPHQFSGGQRQRIAIARALALEPQLIVCDEAVSALDVSVQAQV 454

Query: 487 VQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRA 546
           V+LL     E  +  +FI+HDL +V+     V + + G + +FG    +F      YT+A
Sbjct: 455 VRLLDKLRREMGIAFIFIAHDLPLVRDFADYVMVMQKGEVVEFGTVAQVFDNPQQRYTQA 514

Query: 547 LINA 550
           LI+A
Sbjct: 515 LISA 518



 Score =  146 bits (369), Expect = 2e-39
 Identities = 84/237 (35%), Positives = 133/237 (56%), Gaps = 9/237 (3%)

Query: 324 LRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTGRITIGEHPFD------VSQS 377
           +R++   + RG    I+GESGSGK+     +  L   P G+I+ GE   +      +S  
Sbjct: 25  VRNISYHVDRGETLAILGESGSGKSVSSSAIMNLIDMPPGKISSGEILLNGKDLLKMSAD 84

Query: 378 GRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGEEPADLAAMMDRLGLP 437
            RR+     + MIFQDP   LNP  T+G  + E++R    I + +   +   +  R+ LP
Sbjct: 85  DRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALRTHG-IDNRQAQVEALRLFKRVALP 143

Query: 438 R--SLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEIVQLLKDTIA 495
                + ++PH+ SGGQ+QRV IA AL  +P +++ADEPT+ALDV+VQAE++ LLK+   
Sbjct: 144 EPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIADEPTTALDVTVQAEVLALLKELQR 203

Query: 496 ERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRALINARP 552
           E  M ++ I+HDL +V  +   V + + G + + G    ++    +PYT+ LI A P
Sbjct: 204 ETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGTVREVYRNPQHPYTKKLIAAAP 260