Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 603 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  375 bits (963), Expect = e-108
 Identities = 217/561 (38%), Positives = 327/561 (58%), Gaps = 21/561 (3%)

Query: 7   TTPLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLSP 66
           T P+L V NL    +       ++ DVSF++  GE + I+GESG+GKS    +++ LL+P
Sbjct: 3   TKPVLSVRNLTTSFLVDGEWKSVVRDVSFDVKSGETVAIVGESGSGKSVTSLSLMRLLAP 62

Query: 67  EFQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLAL 126
                 G +  +G+ +  ++  E   +RG  IS IFQ+   SL+P+ ++G Q+ E  L  
Sbjct: 63  ASSHIEGEVLLNGRNLLTLSEREMRGVRGNDISMIFQEPMTSLNPIFTIGRQISEV-LIR 121

Query: 127 DSSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIAD 186
              LS++EARA  + LL +V IP    R+  YPHQFSGG RQRV+IA+ALA  P ++IAD
Sbjct: 122 HKGLSKQEARAETVRLLEKVRIPNAASRFDEYPHQFSGGMRQRVMIAMALASRPKLLIAD 181

Query: 187 EPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEADRT 246
           EPT+ALD T+Q Q+L+L+K+L +E G+S++ +THDMGV++EI +R +VM +G  VE   T
Sbjct: 182 EPTTALDVTIQGQILDLIKLLQEEEGMSVLFITHDMGVVAEIADRTIVMYRGDAVETGAT 241

Query: 247 TAILDQPRHDYTKKLLAAVPRL------RIPTRTAKAE-----DNGRQADSPAIDSDQNP 295
             I  + +H YT+ LL+AVP+L      + PTR    +         Q  +  +   Q P
Sbjct: 242 EDIFRRGQHPYTRALLSAVPKLGSMHDRQWPTRFPVLDLKTGLSTEPQEVAETVACGQTP 301

Query: 296 LLIAEGLSKQFAPQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILA 355
           +L  + L  +F  +   W    G     + +V   L +G    +VGESG GK+T GR + 
Sbjct: 302 VLSVKNLVTRFPIRSGLWARQTGAVH-AVENVSFDLFQGETLSLVGESGCGKSTTGRSIM 360

Query: 356 GLDTAPTGRITI-GEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESI-- 412
            L    +G +++ G     +   G R+ +   VQMIFQDP  SLNPRMT+G  + E    
Sbjct: 361 RLVEPSSGDVSLDGYDVMRLDTVGLRN-MRKSVQMIFQDPFSSLNPRMTVGTAISEPFIK 419

Query: 413 -RFGARIRSGEEPADLAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVA 471
            R G+  ++ E+ ADL   ++++GL   +  R+PH+ SGGQ+QR+ IARAL   P++IVA
Sbjct: 420 HRLGSTKQAKEKTADL---LEKVGLSADMANRYPHEFSGGQRQRIAIARALALDPKVIVA 476

Query: 472 DEPTSALDVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGP 531
           DE  SALDVS++A++  LL D      +  +FISHD+A+V+ +   V +   G I + GP
Sbjct: 477 DESVSALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGP 536

Query: 532 TEFIFSRSDNPYTRALINARP 552
              +F    +PYT+ L+ A P
Sbjct: 537 RAAVFDNPQHPYTKKLMAAVP 557



 Score =  153 bits (387), Expect = 2e-41
 Identities = 93/269 (34%), Positives = 145/269 (53%), Gaps = 15/269 (5%)

Query: 292 DQNPLLIAEGLSKQFAPQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFG 351
           +  P+L    L+  F   G  W       +  +RDV   +  G    IVGESGSGK+   
Sbjct: 2   ETKPVLSVRNLTTSFLVDG-EW-------KSVVRDVSFDVKSGETVAIVGESGSGKSVTS 53

Query: 352 ----RILAGLDTAPTGRITI-GEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGE 406
               R+LA   +   G + + G +   +S+   R      + MIFQ+P  SLNP  TIG 
Sbjct: 54  LSLMRLLAPASSHIEGEVLLNGRNLLTLSEREMRGVRGNDISMIFQEPMTSLNPIFTIGR 113

Query: 407 TLDESIRFGARIRSGEEPADLAAMMDRLGLPR--SLLGRHPHQLSGGQKQRVCIARALLA 464
            + E +     +   E  A+   +++++ +P   S    +PHQ SGG +QRV IA AL +
Sbjct: 114 QISEVLIRHKGLSKQEARAETVRLLEKVRIPNAASRFDEYPHQFSGGMRQRVMIAMALAS 173

Query: 465 RPEIIVADEPTSALDVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDG 524
           RP++++ADEPT+ALDV++Q +I+ L+K    E  M+++FI+HD+ +V  +     +   G
Sbjct: 174 RPKLLIADEPTTALDVTIQGQILDLIKLLQEEEGMSVLFITHDMGVVAEIADRTIVMYRG 233

Query: 525 RIEDFGPTEFIFSRSDNPYTRALINARPQ 553
              + G TE IF R  +PYTRAL++A P+
Sbjct: 234 DAVETGATEDIFRRGQHPYTRALLSAVPK 262