Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 555 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  400 bits (1028), Expect = e-116
 Identities = 220/543 (40%), Positives = 329/543 (60%), Gaps = 19/543 (3%)

Query: 10  LLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLSPEFQ 69
           ++   N+ +       T   + D+SF+L RGE + I+GESG+GKS     I+GLL+    
Sbjct: 25  IIDARNIAVTFKVEHGTVEAVKDISFQLYRGETIAIVGESGSGKSVTARTIMGLLTKRAS 84

Query: 70  QT-SGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLALDS 128
            + S T+ F+G  I   ++ +R  LRG RIS IFQ+  +SL+P+ ++G+Q+ E  + + S
Sbjct: 85  VSKSATVRFNGDDILRFSSRQRRALRGNRISMIFQEPMSSLNPIYTIGSQIVEA-IRVHS 143

Query: 129 SLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIADEP 188
            LSR+EA ARA+DLL +V IPEPE R + YPHQ SGGQRQRV+IA+AL+  PD++IADEP
Sbjct: 144 RLSRKEAEARALDLLRQVQIPEPEARLKQYPHQLSGGQRQRVMIAMALSNDPDVLIADEP 203

Query: 189 TSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEADRTTA 248
           T+ALD TVQ Q+L L++ L  + G++++L+THD+ ++ + ++ V VM+ G++ E + T  
Sbjct: 204 TTALDVTVQAQILNLIRDLQKKRGMAVVLITHDLTIVKQFSDYVYVMQHGEMREHNTTER 263

Query: 249 ILDQPRHDYTKKLLAAVPRLRIPTRTAKAEDNGRQADSPAIDSDQNPLLIAEGLSKQFAP 308
           +   P+H YTK+LLA+ PR      TAK            +  +   LL A G+   F  
Sbjct: 264 LFAAPQHPYTKRLLASEPR-----GTAK-----------PLPENSGVLLTASGVRVSFMM 307

Query: 309 QGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTGRITIG 368
           +         K    +  +G+ L R    G+VGESGSGKTTFG+ L  L+    G +   
Sbjct: 308 RYGGLFKPELKELIAVDSLGLTLKRHETLGLVGESGSGKTTFGQSLLRLNEPVGGEVIFD 367

Query: 369 EHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGEEPAD-L 427
               D         L  R+Q++FQDP  SLNPRMTIG+ ++E +      R+  E  + +
Sbjct: 368 GERVDGRSRSEMRPLRSRMQIVFQDPFASLNPRMTIGQIIEEGLIINGLGRTKAERLERV 427

Query: 428 AAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEIV 487
              ++  G+P ++L R PH+ SGGQ+QR+ IARA+   PE I+ DEPTSALD+SVQA+I+
Sbjct: 428 RDALEAAGMPGNILSRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQII 487

Query: 488 QLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRAL 547
            LL+    ER ++ +FISHDL +V+A+C  V + + GRI + GP E + +     YT+ L
Sbjct: 488 DLLRKLQDERGLSYLFISHDLKVVRALCHRVIVMQGGRIVEEGPVEDVLTNPKTEYTQRL 547

Query: 548 INA 550
           + A
Sbjct: 548 VRA 550



 Score =  166 bits (421), Expect = 2e-45
 Identities = 95/239 (39%), Positives = 144/239 (60%), Gaps = 10/239 (4%)

Query: 324 LRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDT-------APTGRITIGEHPFDVSQ 376
           ++D+  +L RG    IVGESGSGK+   R + GL T       + T R   G+     S 
Sbjct: 45  VKDISFQLYRGETIAIVGESGSGKSVTARTIMGLLTKRASVSKSATVRFN-GDDILRFSS 103

Query: 377 SGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGEEPADLAAMMDRLGL 436
             RR+    R+ MIFQ+P  SLNP  TIG  + E+IR  +R+   E  A    ++ ++ +
Sbjct: 104 RQRRALRGNRISMIFQEPMSSLNPIYTIGSQIVEAIRVHSRLSRKEAEARALDLLRQVQI 163

Query: 437 PR--SLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEIVQLLKDTI 494
           P   + L ++PHQLSGGQ+QRV IA AL   P++++ADEPT+ALDV+VQA+I+ L++D  
Sbjct: 164 PEPEARLKQYPHQLSGGQRQRVMIAMALSNDPDVLIADEPTTALDVTVQAQILNLIRDLQ 223

Query: 495 AERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRALINARPQ 553
            +R M +V I+HDL IV+     VY+ + G + +   TE +F+   +PYT+ L+ + P+
Sbjct: 224 KKRGMAVVLITHDLTIVKQFSDYVYVMQHGEMREHNTTERLFAAPQHPYTKRLLASEPR 282