Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 606 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  340 bits (872), Expect = 9e-98
 Identities = 205/558 (36%), Positives = 310/558 (55%), Gaps = 21/558 (3%)

Query: 10  LLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLSPE-F 68
           LL VE L +        + ++ D+SF +  G  + ++GESG+GKS    + + L      
Sbjct: 9   LLSVEGLSVEF----GDSRVVDDISFRVEPGRTVAVVGESGSGKSVTSLSTMRLADMMGA 64

Query: 69  QQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLALDS 128
              +G I F+GK +   +  E  ++RG+ I+ IFQ+   SL+P+ ++G Q+ E  L L  
Sbjct: 65  TYPTGKILFEGKDLLKASQKEMRSIRGKEIAMIFQEPMTSLNPVFTIGDQICEV-LVLHE 123

Query: 129 SLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIADEP 188
            L +  A  +A  LL  V +P+       YPHQ SGG RQRV+IA+ALA  P ++IADEP
Sbjct: 124 KLGKTAAMEQAKQLLDMVRLPDAAELLHRYPHQLSGGMRQRVMIAMALACRPKLLIADEP 183

Query: 189 TSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEADRTTA 248
           T+ALD T+Q Q+L +++ L  + G+ ++ +THDMGV++E+ + V+VM KG+ VE      
Sbjct: 184 TTALDVTIQAQILNIMRDLQKKLGMGMVFITHDMGVVAEMADDVVVMWKGKKVEEGPVKD 243

Query: 249 ILDQPRHDYTKKLLAAVPRL----------RIPTRTAKAEDN---GRQADSPAIDSDQNP 295
           I   P+H YT+ LL+AVPRL          R+P    +       G +        DQ P
Sbjct: 244 IFANPQHPYTRALLSAVPRLGSMEGEAFPKRLPLTVLQDGQPVVIGEERVQDTAKYDQKP 303

Query: 296 LLIAEGLSKQFAPQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILA 355
           LL  + L  +F  +   +G    +    ++ V   +  G    +VGESGSGK+T GR + 
Sbjct: 304 LLSVKDLFVRFDIRKNLFGKATHR-LSAVQKVSFDIHAGETLALVGESGSGKSTIGRTIQ 362

Query: 356 GLDTAPTGRITIGEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRFG 415
            L TA +G I      +    +  R  +   VQ IFQDP  SL+PR T+G ++ E I   
Sbjct: 363 QLQTAVSGEIAFNGRSYSQMSAAERFRMRQEVQYIFQDPFASLDPRKTVGFSIAEPINTH 422

Query: 416 ARIRSGEE-PADLAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEP 474
             I   +     +  +++R+GL      R+PH+ SGGQ+QRVCIARAL + P++I+ADE 
Sbjct: 423 GLINDQKAVRRRVDELLERVGLSSEHAARYPHEFSGGQRQRVCIARALASDPKLIIADEA 482

Query: 475 TSALDVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEF 534
            SALDVS+QA+I+ L  D  AER +  +FISHD+A+V+ M   V +   G+I + G  + 
Sbjct: 483 LSALDVSIQAQIINLFMDLQAERGLAYLFISHDMAVVEKMSHRVAVLYLGQIMELGSRQQ 542

Query: 535 IFSRSDNPYTRALINARP 552
           +F    + YTR L++A P
Sbjct: 543 VFETPTHDYTRRLLSAVP 560



 Score =  166 bits (419), Expect = 3e-45
 Identities = 104/273 (38%), Positives = 152/273 (55%), Gaps = 20/273 (7%)

Query: 289 IDSDQNPLLIAEGLSKQFAPQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKT 348
           I ++ N LL  EGLS +F           G  R  + D+  R+  G    +VGESGSGK+
Sbjct: 2   IAANANALLSVEGLSVEF-----------GDSRV-VDDISFRVEPGRTVAVVGESGSGKS 49

Query: 349 TFGRILAGLD-----TAPTGRITI-GEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRM 402
                   L      T PTG+I   G+     SQ   RS     + MIFQ+P  SLNP  
Sbjct: 50  VTSLSTMRLADMMGATYPTGKILFEGKDLLKASQKEMRSIRGKEIAMIFQEPMTSLNPVF 109

Query: 403 TIGETLDESIRFGARIRSGEEPADLAAMMDRLGLPRS--LLGRHPHQLSGGQKQRVCIAR 460
           TIG+ + E +    ++           ++D + LP +  LL R+PHQLSGG +QRV IA 
Sbjct: 110 TIGDQICEVLVLHEKLGKTAAMEQAKQLLDMVRLPDAAELLHRYPHQLSGGMRQRVMIAM 169

Query: 461 ALLARPEIIVADEPTSALDVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYI 520
           AL  RP++++ADEPT+ALDV++QA+I+ +++D   +  M MVFI+HD+ +V  M   V +
Sbjct: 170 ALACRPKLLIADEPTTALDVTIQAQILNIMRDLQKKLGMGMVFITHDMGVVAEMADDVVV 229

Query: 521 FKDGRIEDFGPTEFIFSRSDNPYTRALINARPQ 553
              G+  + GP + IF+   +PYTRAL++A P+
Sbjct: 230 MWKGKKVEEGPVKDIFANPQHPYTRALLSAVPR 262