Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 616 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  362 bits (930), Expect = e-104
 Identities = 206/560 (36%), Positives = 328/560 (58%), Gaps = 21/560 (3%)

Query: 8   TPLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLSPE 67
           +P+L V+NL            ++ ++SF++   E + I+GESG+GKS    +I+ LL  +
Sbjct: 16  SPVLSVQNLTTSFRVDGGWKSVVRNMSFDIAPRETVAIVGESGSGKSVTSLSIMRLLDRK 75

Query: 68  FQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLALD 127
             +  G +   G+ +  +  +E   +RG+ IS IFQ+   SL+P+  +G Q+ E  L + 
Sbjct: 76  TSRIEGKVMLGGRDLLALPEEEMRKVRGKDISMIFQEPMTSLNPIFPIGKQIAEA-LTVH 134

Query: 128 SSLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIADE 187
             +S   A+A  I LL +V IP    R+ +YPHQFSGG RQRV+IA+ALA  P ++IADE
Sbjct: 135 QDISSSAAKAEVIRLLEKVRIPNAASRFGDYPHQFSGGMRQRVMIAMALASKPKLLIADE 194

Query: 188 PTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVEADRTT 247
           PT+ALD T+Q Q+L+L+K L +E G+S++ +THDMGV++E+ +R +VM +G VVE   T 
Sbjct: 195 PTTALDVTIQGQILDLIKQLQEEEGMSVLFITHDMGVVAEVADRTIVMFRGDVVETGTTD 254

Query: 248 AILDQPRHDYTKKLLAAVPRL----------RIPTRTAKAEDNGRQADS-PAIDSDQNPL 296
            I  + +H YT+ LL+AVP+L          R P    K  ++    ++   +   + P+
Sbjct: 255 DIFHRGQHPYTRALLSAVPKLGSMRSRLLPARFPIIDIKTGESPPVVETKDTVSGGKTPI 314

Query: 297 LIAEGLSKQFAPQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAG 356
           L  + L+ +F  +   +G   G     +  V   LA G    +VGESG GK+T GR +  
Sbjct: 315 LSVKDLTTRFDIRSGLFGRKSGAVH-AVEKVSFDLAEGETLSLVGESGCGKSTTGRSITR 373

Query: 357 LDTAPTGRITI-GEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESI--- 412
           L    +G +T+ G     + ++  R+ +   VQM+FQDP  SL+PRM++G  + E     
Sbjct: 374 LIEPTSGNVTLDGYEVLKLDRTTLRT-MRRSVQMVFQDPFASLDPRMSVGTAIMEPFMEH 432

Query: 413 RFGARIRSGEEPADLAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVAD 472
           R G + ++ E+ ADL   ++++GL   ++ R PH+ SGGQ+QR+ IAR+L+  P++IVAD
Sbjct: 433 RLGQKAQAREKAADL---LEKVGLSPDMMKRFPHEFSGGQRQRIAIARSLMLDPKVIVAD 489

Query: 473 EPTSALDVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPT 532
           E  SALDVS++A++  LL D      +  +FISHD+A+V+ +   V +   G I + GP 
Sbjct: 490 EAVSALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPR 549

Query: 533 EFIFSRSDNPYTRALINARP 552
             +F    +PYT+ L++A P
Sbjct: 550 AAVFDNPQHPYTKKLMSAVP 569



 Score =  151 bits (381), Expect = 8e-41
 Identities = 88/267 (32%), Positives = 148/267 (55%), Gaps = 15/267 (5%)

Query: 294 NPLLIAEGLSKQFAPQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFG-- 351
           +P+L  + L+  F   G  W       +  +R++   +A      IVGESGSGK+     
Sbjct: 16  SPVLSVQNLTTSFRVDG-GW-------KSVVRNMSFDIAPRETVAIVGESGSGKSVTSLS 67

Query: 352 --RILAGLDTAPTGRITIGEHPFDVSQSGRRSGLLGR-VQMIFQDPSVSLNPRMTIGETL 408
             R+L    +   G++ +G              + G+ + MIFQ+P  SLNP   IG+ +
Sbjct: 68  IMRLLDRKTSRIEGKVMLGGRDLLALPEEEMRKVRGKDISMIFQEPMTSLNPIFPIGKQI 127

Query: 409 DESIRFGARIRSGEEPADLAAMMDRLGLPR--SLLGRHPHQLSGGQKQRVCIARALLARP 466
            E++     I S    A++  +++++ +P   S  G +PHQ SGG +QRV IA AL ++P
Sbjct: 128 AEALTVHQDISSSAAKAEVIRLLEKVRIPNAASRFGDYPHQFSGGMRQRVMIAMALASKP 187

Query: 467 EIIVADEPTSALDVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRI 526
           ++++ADEPT+ALDV++Q +I+ L+K    E  M+++FI+HD+ +V  +     +   G +
Sbjct: 188 KLLIADEPTTALDVTIQGQILDLIKQLQEEEGMSVLFITHDMGVVAEVADRTIVMFRGDV 247

Query: 527 EDFGPTEFIFSRSDNPYTRALINARPQ 553
            + G T+ IF R  +PYTRAL++A P+
Sbjct: 248 VETGTTDDIFHRGQHPYTRALLSAVPK 274