Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 548 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  374 bits (959), Expect = e-108
 Identities = 222/555 (40%), Positives = 317/555 (57%), Gaps = 25/555 (4%)

Query: 3   VEHVTTP---LLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNA 59
           + H TT    +L V NL +    G   +  + D+SF+L  GEIL IIGESG+GKS   + 
Sbjct: 1   MSHSTTSADVVLSVRNLTVDLPRGMERSHAVKDISFDLHAGEILCIIGESGSGKSVTAST 60

Query: 60  ILGLLSPEFQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQV 119
           I+GLLSP    +SG I+F G  I     ++   LRG+ +S IFQD  ++L+PLM+VG QV
Sbjct: 61  IMGLLSPVITVSSGEIQFKGMDILAAKEEKIRPLRGQAVSIIFQDPLSALNPLMTVGDQV 120

Query: 120 EETCLALDSSLSRREAR-ARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAG 178
            E   A    +  RE R A+ ++LL  VG+P+P      YP + SGGQRQRV+IA+ALA 
Sbjct: 121 AEVLEA--HGVGTRETRNAKVLELLEEVGLPDPLLMRLQYPFRLSGGQRQRVMIAMALAL 178

Query: 179 SPDIIIADEPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKG 238
            PD++IADEPT+ALD T Q Q+LEL++ +     +S++ +THD GV++EI +RV+VM KG
Sbjct: 179 DPDVLIADEPTTALDVTTQAQILELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKG 238

Query: 239 QVVEADRTTAILDQPRHDYTKKLLAAVPRLRIPTRTAKAEDNGRQADSPAIDSDQNPLLI 298
            +VE  R   +L  P H YT++L+AAVPR+R   R              +ID +   +L 
Sbjct: 239 YLVEQGRADQVLINPVHPYTQRLVAAVPRMRSVER--------------SIDEEVPVVLE 284

Query: 299 AEGLSKQFAPQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLD 358
            E L K++   G  +   + +    + +V  +L +G   G+VGESGSGK++ GR+L  L 
Sbjct: 285 VENLEKEYRSSGSFF--RKARTVKAVNNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKLL 342

Query: 359 TAPTGRITIGEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDES-IRFGAR 417
               G I                 L   +QMIFQDP  SLNPR TIG+ L    +  G  
Sbjct: 343 DPDGGAIRFDGRDIATMDESAFRALRPYIQMIFQDPFASLNPRHTIGKILTVGPLAHGMA 402

Query: 418 IRSGEEPADLAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSA 477
           +      A    ++  +GL      R PH+ SGGQ+QR+ IARAL+  P ++VADE  SA
Sbjct: 403 LHEARTKA--LGILKLVGLDEQAYDRFPHEFSGGQRQRIGIARALMFDPVVLVADEAVSA 460

Query: 478 LDVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFS 537
           LDVS+QA++++LL     E  + M+FI+HDL +   +C  V +   G + + GP   IF 
Sbjct: 461 LDVSIQAQVLELLARVQREMKVAMIFITHDLRVASQICDDVLVMHKGTVVEQGPPTKIFR 520

Query: 538 RSDNPYTRALINARP 552
              +PYT+ L+ A P
Sbjct: 521 APTHPYTQKLVAAIP 535



 Score =  137 bits (346), Expect = 8e-37
 Identities = 85/246 (34%), Positives = 140/246 (56%), Gaps = 10/246 (4%)

Query: 317 RGKPR-FGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPTGRITIGEHPFD-- 373
           RG  R   ++D+   L  G I  I+GESGSGK+     + GL  +P   ++ GE  F   
Sbjct: 23  RGMERSHAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGL-LSPVITVSSGEIQFKGM 81

Query: 374 ---VSQSGRRSGLLGR-VQMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGEEPADLAA 429
               ++  +   L G+ V +IFQDP  +LNP MT+G+ + E +            A +  
Sbjct: 82  DILAAKEEKIRPLRGQAVSIIFQDPLSALNPLMTVGDQVAEVLEAHGVGTRETRNAKVLE 141

Query: 430 MMDRLGLPRSLLGR--HPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEIV 487
           +++ +GLP  LL R  +P +LSGGQ+QRV IA AL   P++++ADEPT+ALDV+ QA+I+
Sbjct: 142 LLEEVGLPDPLLMRLQYPFRLSGGQRQRVMIAMALALDPDVLIADEPTTALDVTTQAQIL 201

Query: 488 QLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRAL 547
           +L++     + M+++FI+HD  +V  +   V + + G + + G  + +     +PYT+ L
Sbjct: 202 ELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKGYLVEQGRADQVLINPVHPYTQRL 261

Query: 548 INARPQ 553
           + A P+
Sbjct: 262 VAAVPR 267