Pairwise Alignments

Query, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 548 a.a., dipeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  364 bits (934), Expect = e-105
 Identities = 212/554 (38%), Positives = 316/554 (57%), Gaps = 40/554 (7%)

Query: 6   VTTPLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLS 65
           +T PLL+VENL +   +   T  +L +V+F +  GE + +IGE+G+GKS     I+G L 
Sbjct: 1   MTEPLLKVENLNVTFSNYGRTRQVLRNVAFTVAAGERVALIGETGSGKSVTAKTIIGTLP 60

Query: 66  PEFQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLA 125
                TSG I  DG+ +  +   ERE L+G   S I QD  +S +P+  +G  +++    
Sbjct: 61  KNAAITSGAIIIDGRDVLALPRREREALKGTAFSLIMQDPLSSFNPVFKIGTHLDDVMRF 120

Query: 126 LDS----SLSRREARARAIDLLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPD 181
            D     + S+ E R R   +L RV + + ER    YP + SGG RQRV+I +AL   P 
Sbjct: 121 ADKRDGINSSKAERRNRIAAVLRRVQLADTERVMNAYPSELSGGMRQRVLIGLALLHQPK 180

Query: 182 IIIADEPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVV 241
           ++IADEP +ALD T Q ++L L+  LV E  ++++++TH++GV+ ++ +RV+VM  G +V
Sbjct: 181 LLIADEPGTALDVTTQDEILNLINQLVAEENMALLMITHNLGVVRKVADRVVVMHHGDIV 240

Query: 242 EADRTTAILDQPRHDYTKKLLAAVPRLRIPTRTAKAEDNGRQADSPAIDSDQNPLLIAEG 301
           E    T IL  P  DYT+ LL AVP L     T  A+            S + P++  EG
Sbjct: 241 ETGPCTQILHSPAADYTRSLLDAVPPLYGSRVTDLAQ------------STRQPIITIEG 288

Query: 302 LSKQFAPQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAP 361
           L+K +         GR      +RDV I L  G + G+ GESGSGKT+  R++ GL    
Sbjct: 289 LNKIY---------GRRNGYHAVRDVNITLKEGEVFGLAGESGSGKTSVARMIMGLSRPT 339

Query: 362 TGRITIGEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLD---ESIRFGARI 418
           +G + I      V + G+R       Q+++Q+P  SLNP+ T+ +TL    +SI    ++
Sbjct: 340 SGNLVIDA---PVPERGKRL-----TQIVYQNPGTSLNPKRTVRQTLALPLKSIGMDGQV 391

Query: 419 RSGEEPADLAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSAL 478
           R       +  +M+ + LP+S LG++PH+LSGGQKQRV IARAL A P+I++ DEPT+AL
Sbjct: 392 RESR----MQELMELVRLPQSYLGKYPHELSGGQKQRVAIARALAAEPKILILDEPTAAL 447

Query: 479 DVSVQAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSVYIFKDGRIEDFGPTEFIFSR 538
           DVSVQ  ++ LL     E  +T + ISHDL++++  CS + I   G I + G T  +F+ 
Sbjct: 448 DVSVQKTVIDLLLQLRKELGLTYLMISHDLSLMRNFCSRIAIMLRGEIVEEGVTSAVFAE 507

Query: 539 SDNPYTRALINARP 552
             +PYTRALI A P
Sbjct: 508 PSHPYTRALIAAIP 521