Pairwise Alignments

Query, 505 a.a., sugar ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 523 a.a., L-arabinose ABC transporter, ATP-binding protein AraG from Variovorax sp. SCN45

 Score =  285 bits (729), Expect = 3e-81
 Identities = 173/487 (35%), Positives = 285/487 (58%), Gaps = 23/487 (4%)

Query: 12  AGRVAKLTDVWKSYGAVPVLKGVSLVLHAGEVHALLGGNGAGKSSLMKIMSGVIASNA-- 69
           AG + ++  + K++  V  L  V+L + AGE+HA++G NGAGKS+LMK++SGV   ++  
Sbjct: 10  AGVILEMRGITKTFPGVKALSNVNLGVRAGEIHAVVGENGAGKSTLMKVLSGVYPCDSYE 69

Query: 70  GAIEINGRALTHASPALAQKLGLYLVPQEAHILPNQSVLENICLGLAASPR------ALR 123
           G I   G        A ++KLG+ ++ QE  ++P  S+ ENI LG   +        A  
Sbjct: 70  GEIRFEGEVRRFRGIADSEKLGIIIIHQELALVPLLSIAENIFLGNEITRGGVIDWFAAY 129

Query: 124 PRVEQLVAELSVSLDLDVQAAALEIAERQIVEILRGLVRDARVLILDEPTSALTPFETSA 183
            R  +L+A++ +          L + ++Q+VEI + L ++ ++LILDEPT++L   ++ A
Sbjct: 130 ARTRELLAKVGLKEPPTTLVTDLGVGKQQLVEIAKALAKEVKLLILDEPTASLNEKDSDA 189

Query: 184 LFQRVRKLQSQGVGIFFISHKLREIREICGTISVLRDGVIVLSGPLDSYSDAVIIDAMSR 243
           L   + +L+ QG+    ISHKL EI ++  +++VLRDG  V +  +D  +  +  D + R
Sbjct: 190 LLMLLLELKRQGIASILISHKLNEIAKVADSVTVLRDGATVET--MDCRAQPISEDRIIR 247

Query: 244 VQIADDADKKRVCRKVSQIGKPRLSVRD--------LSGEGFRDISLDVRAGEILGLAGV 295
             +  D    R  ++  +IG+    VRD           E  + +SL+VR GEI+G+AG+
Sbjct: 248 GMVGRDM-AHRYPQRAPKIGETVFEVRDWRVHHALHADREQIKGVSLNVRQGEIVGIAGL 306

Query: 296 VGAGRTEFAETLFGLR--PQMGGSVVFDGAELKKRSPRICIDLGLVYLPEDRQQHGLFLE 353
           +GAGRTE A ++FG     ++ GSV+  G  +   + R  ID G+ Y+ EDR+  GL LE
Sbjct: 307 MGAGRTELAMSVFGRSYGQRISGSVLMHGKPVDVSTVRKAIDHGIAYVTEDRKGLGLVLE 366

Query: 354 APLSWNVSSYLVHRLP--FFLRPGAERKVFDGFRASMGIKCTGADQEARGLSGGNQQKVL 411
             +  N+S   +  +     +  G E KV + +R ++ I+C+G +Q    LSGGNQQKV+
Sbjct: 367 EDIRRNISLANLEAVSESAVIDTGREFKVANEYRKALNIRCSGVEQLVVNLSGGNQQKVV 426

Query: 412 LAKCLSARPKVLILDEPTRGVDVAARNDLYDVIRRLAADGVAIILISSDFHEIEQLADRV 471
           L+K L  +P++LILDEPTRG+DV A+ ++Y +I +LA++G  I++ISS+  E+  + DR+
Sbjct: 427 LSKWLFTKPELLILDEPTRGIDVGAKYEIYTIIDQLASEGKGILMISSELPELLGMCDRI 486

Query: 472 EIMAFGQ 478
            +M  G+
Sbjct: 487 YVMNEGR 493



 Score = 56.2 bits (134), Expect = 3e-12
 Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 14/225 (6%)

Query: 31  LKGVSLVLHAGEVHALLGGNGAGKSSLMKIMSGVIASN--AGAIEINGRALTHASPALAQ 88
           +KGVSL +  GE+  + G  GAG++ L   + G       +G++ ++G+ +  ++   A 
Sbjct: 288 IKGVSLNVRQGEIVGIAGLMGAGRTELAMSVFGRSYGQRISGSVLMHGKPVDVSTVRKAI 347

Query: 89  KLGLYLVPQEAH---ILPNQSVLENICLGL--AASPRALRPRVEQLVAELSVSLDLDVQA 143
             G+  V ++     ++  + +  NI L    A S  A+     +          L+++ 
Sbjct: 348 DHGIAYVTEDRKGLGLVLEEDIRRNISLANLEAVSESAVIDTGREFKVANEYRKALNIRC 407

Query: 144 AALEI-------AERQIVEILRGLVRDARVLILDEPTSALTPFETSALFQRVRKLQSQGV 196
           + +E          +Q V + + L     +LILDEPT  +       ++  + +L S+G 
Sbjct: 408 SGVEQLVVNLSGGNQQKVVLSKWLFTKPELLILDEPTRGIDVGAKYEIYTIIDQLASEGK 467

Query: 197 GIFFISHKLREIREICGTISVLRDGVIVLSGPLDSYSDAVIIDAM 241
           GI  IS +L E+  +C  I V+ +G  V   P+   S   I+ A+
Sbjct: 468 GILMISSELPELLGMCDRIYVMNEGRFVAEFPVAEASQERIMHAI 512