Pairwise Alignments

Query, 505 a.a., sugar ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 515 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

 Score =  304 bits (779), Expect = 4e-87
 Identities = 194/495 (39%), Positives = 281/495 (56%), Gaps = 19/495 (3%)

Query: 21  VWKSYGAVPVLKGVSLVLHAGEVHALLGGNGAGKSSLMKIMSGVIASNAGAIEINGRALT 80
           V K++G V VL GVS  L  G V+ LLG NGAGKS+LMKI++G      G + ING+   
Sbjct: 20  VVKAFGPVQVLHGVSFALAPGRVYGLLGENGAGKSTLMKILAGYEQLTGGTLRINGQPQQ 79

Query: 81  HASPALAQKLGLYLVPQEAHILPNQSVLENICLG------LAASPRALRPRVEQLVAELS 134
             S   A+ LG+ L+ QE ++  + SV +NI LG            A+       ++ + 
Sbjct: 80  FGSSRDAEALGIVLIHQEFNLAEDLSVAQNIFLGHEKKKGWLLDDAAMEREAAAALSAVG 139

Query: 135 VSLDLDVQAAALEIAERQIVEILRGLVRDARVLILDEPTSALTPFETSALFQRVRKLQSQ 194
           +++D   +   L +AE+Q+VEI + + R AR+L++DEPT+ LTP ET  LF+ + +L++ 
Sbjct: 140 LNIDPRTKVRKLIVAEKQLVEIAKAIARRARLLVMDEPTATLTPGETERLFKLIAQLRAD 199

Query: 195 GVGIFFISHKLREIREICGTISVLRDGVIVLSGPLDSYSDAVIIDAMSRVQIADDADKKR 254
           GV I +ISHKL E+ ++   + V+RDG  V   P    +   + + M   ++AD    + 
Sbjct: 200 GVTIVYISHKLDEVEQVTDEVIVMRDGRFVARAPTPEVTRQQMANLMVGRELADLYPPRD 259

Query: 255 VCRKVSQIGKPRLSVRDLSGEGF-RDISLDVRAGEILGLAGVVGAGRTEFAETLFGLRPQ 313
           V   V     P + VRD +  G+ +D S +VR GEILG AG+VGAGRTE  E L GLRP 
Sbjct: 260 V---VVAADAPAMRVRDFNVPGWAQDASFEVRPGEILGFAGLVGAGRTELFEGLLGLRPA 316

Query: 314 MG-----GSVVFDGAELKKRSPRICIDLGLVYLPEDRQQHGLFLEAPLSWNVSSYLVHRL 368
            G     G  V  G     R+PR     GL YL EDR+  GL +   L  N++   + R 
Sbjct: 317 SGNVEMLGKPVPGGKGW--RNPRDAAKHGLTYLSEDRKGKGLHVNFGLRQNLTLMALERY 374

Query: 369 PF-FLRPGAERKVFDGFRASMGIKCTGADQEARGLSGGNQQKVLLAKCLSARPKVLILDE 427
              +LRP AER    G     GI+    + +A  LSGGNQQK+ LAK L  RPKV++LDE
Sbjct: 375 AQPWLRPEAERGALAGAVKEYGIRTGSLEVKASSLSGGNQQKLALAKVLQPRPKVVVLDE 434

Query: 428 PTRGVDVAARNDLYDVIRRLAADGVAIILISSDFHEIEQLADRVEIMAFGQSGGKL-TDQ 486
           PTRGVDV A+ D+Y +I+RLA +G+A+I++SS+  E+  L  RV +M  G+    L  D 
Sbjct: 435 PTRGVDVGAKRDIYFLIQRLAREGLAVIVVSSELMELIGLCHRVAVMRAGRLVATLDADH 494

Query: 487 ISVDAIARLAFGASE 501
           ++ + +   A G ++
Sbjct: 495 LTEEELIAHATGTAD 509