Pairwise Alignments

Query, 343 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 339 a.a., monosaccharide ABC transporter membrane protein, CUT2 family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  157 bits (397), Expect = 4e-43
 Identities = 98/301 (32%), Positives = 157/301 (52%), Gaps = 3/301 (0%)

Query: 10  VATLILVLAVAYAAIGTAAPGYLSGATASVVVSNSLVLMLISLGTMMVILTRNIDVSSGS 69
           V ++ L  A+ +         +LSGA    V+  +  L+++++   +V+ T  ID+S GS
Sbjct: 27  VVSIGLFFALCFVLFALVTDNFLSGANLLNVIRQNAPLLIVAVAMTLVVTTGGIDLSVGS 86

Query: 70  VLGLSAAVLGLSLTAG-VSLPLAIAFCLATGAVAGAFNGLMVAYLGIPSIVATLGTLGLY 128
            L L  A+  ++L A  +  PL +   LA GA+ GA NG  +AY GIP+ + TL TL + 
Sbjct: 87  TLALVGALAAMALNAWHLPWPLVLLGGLAVGAMIGALNGYFIAYAGIPAFIVTLATLTII 146

Query: 129 RGIMLVLTGGRWIEDLPQGLKALAANLGFGFSV-LTIVVLALVALAWI-VLRRTRFGRNF 186
           RG+ ++LT G  I    +    LA   G+   V LT  +  LV L  + VL + RFGR  
Sbjct: 147 RGLAMLLTQGYSIPVPREEAAFLALGRGWFLGVPLTAWLALLVTLGGVLVLGKMRFGRYL 206

Query: 187 YAVGDNRAAAHHLGVPVKLVQFSAFVATGVCAALAGLVFAAQIGFIPNQAGNGIELKAIA 246
             +G N  +    GV  + V    ++ +G+ AALAG++  A++G   +  G G EL+ IA
Sbjct: 207 TGIGANAESVRRAGVNHRGVLLRVYMLSGMAAALAGMIVTARLGSGSSNQGEGFELEVIA 266

Query: 247 VNVLGGVSLLGGTGSVAGVFTAVIFITSIDSALVFLKIPAYWNDFIAGAILLSVLLLDGR 306
             VLG  SL GG G++ G    V+ + +I + L+   +  ++     G I+L  + L+ R
Sbjct: 267 AVVLGSTSLFGGFGTIVGTLLGVLTMAAIKNGLILAHVSPFYTQIATGLIVLLAIWLNTR 326

Query: 307 I 307
           I
Sbjct: 327 I 327