Pairwise Alignments

Query, 343 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 342 a.a., autoinducer 2 ABC transporter permease LsrC from Escherichia coli ECRC62

 Score =  326 bits (836), Expect = 5e-94
 Identities = 172/343 (50%), Positives = 236/343 (68%), Gaps = 2/343 (0%)

Query: 1   MLDLFSRNRVATLILVLAVAYAAIGTAAPGYLSGATASVVVSNSLVLMLISLGTMMVILT 60
           ML     NR  T +L + + +A  G     YLS  T ++V S++ +L+L+++G  +V+LT
Sbjct: 1   MLKFIQNNREITALLAVVLLFALPGFLDRQYLSVQTLTMVYSSAQILILLAMGATLVMLT 60

Query: 61  RNIDVSSGSVLGLSAAVLGLSLTAGVSLPLAIAFCLATGAVAGAFNGLMVAYLGIPSIVA 120
           RNIDVS GS+ G+ A +LG+ L AG SLP+A    L  G +AG FNG++VA+L IP+IVA
Sbjct: 61  RNIDVSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGLLAGFFNGVLVAWLKIPAIVA 120

Query: 121 TLGTLGLYRGIMLVLTGGRWIEDLPQGLKALAANLGFGFSVLTIVVLALVA-LAWIVLRR 179
           TLGTLGLYRGIML+ TGG+WIE LP  LK L+A L FG S +  + + LVA +AW+ L +
Sbjct: 121 TLGTLGLYRGIMLLWTGGKWIEGLPAELKQLSAPLLFGVSAIGWLTIILVAFMAWL-LAK 179

Query: 180 TRFGRNFYAVGDNRAAAHHLGVPVKLVQFSAFVATGVCAALAGLVFAAQIGFIPNQAGNG 239
           T FGR+FYA GDN   A  LGV  + ++  AF   G  AALAG+VFA+QIGFIPNQ G G
Sbjct: 180 TAFGRSFYATGDNLQGARQLGVRTEAIRIVAFSLNGCMAALAGIVFASQIGFIPNQTGTG 239

Query: 240 IELKAIAVNVLGGVSLLGGTGSVAGVFTAVIFITSIDSALVFLKIPAYWNDFIAGAILLS 299
           +E+KAIA  VLGG+SLLGG+G++ G      F+T IDS LV L+IPA+WNDFIAG +LL+
Sbjct: 240 LEMKAIAACVLGGISLLGGSGAIIGAVLGAWFLTQIDSVLVLLRIPAWWNDFIAGLVLLA 299

Query: 300 VLLLDGRIRQIIDRRIRARRYGVHERGPTQSRETTTARNVEAS 342
           VL+ DGR+R  ++R +R ++Y      P+  +  ++ +  EA+
Sbjct: 300 VLVFDGRLRCALERNLRRQKYARFMTPPSSVKPASSGKKREAA 342