Pairwise Alignments

Query, 343 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 319 a.a., ribose ABC transporter, periplasmic ribose-binding subunit from Pseudomonas putida KT2440

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 74/264 (28%), Positives = 117/264 (44%), Gaps = 12/264 (4%)

Query: 10  ALAAALLAGTVLASGAAHAENQ--IAFIPKLVGVGFFTSGGAGAV---KAGEEVGAKVTY 64
           ALA        L   AAHAE++  +A + K +   FF +   GA    K   +    +  
Sbjct: 11  ALAVISSLSLALPLSAAHAEDKPKVALVMKSLANEFFRTMEDGAKDYQKTHADEFELIAN 70

Query: 65  DGPTEPSVSGQVQFINNFVNQGYNALIVSSVSPDGLCPALKRAMERGVLVMTWDSDVNPD 124
               E     Q++ +   VN G  AL+++      L  A+K+AM++GV+V+  D+ ++PD
Sbjct: 71  GIKNETDTGEQIRIVEQMVNAGAKALVIAPADSKALVSAVKKAMDQGVVVINIDNRLDPD 130

Query: 125 -CRSYYIN---QGTPEQLGGLLV-DMAAEGVKKEKAKVAFFYSSPTVTDQNAWAEAAKAK 179
             +S  I+    G   + G  LV D  A    K   +V       T T  NA    A  K
Sbjct: 131 LLKSKGISVPFVGPDNRKGARLVGDYLASQKLKAGDQVGIIEGVSTTT--NAQQRTAGFK 188

Query: 180 IAKEHPGWEIVTTQYGYNDAQKSLQTAESILQTYPDLDAIIAPDANALPAAAQAAENLKR 239
            A +    +IV+ Q G  +  K    A S+L  YPDL A++A + +    A  A     +
Sbjct: 189 DAMDAAQMKIVSVQSGNWEIDKGNAVAASMLNEYPDLKALLAGNDSMALGAVSAVRAAGK 248

Query: 240 AEGVTIVGFSTPNVMRPYIERGTI 263
              V +VG+   N ++P +E G +
Sbjct: 249 TGQVQVVGYDNINAIKPMLEDGRV 272