Pairwise Alignments

Query, 343 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 328 a.a., autoinducer 2 ABC transporter substrate-binding protein from Serratia liquefaciens MT49

 Score =  112 bits (279), Expect = 2e-29
 Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 7/304 (2%)

Query: 11  LAAALLAGTVLASGAAHAEN--QIAFIPKLVGVGFFTSGGAGAVKAGEEVGAKVTYDGPT 68
           L A +++  +L++  A A    +IA + K+ G+ +F     G   A +++       GP+
Sbjct: 8   LNACVVSACMLSTTPAFAAEKYEIAVVAKVTGIPWFNRMEVGVNDAAKKLDVNAYQTGPS 67

Query: 69  EPSVSGQVQFINNFVNQGYNALIVSSVSPDGLCPALKRAMERGVLVMTWDSDVNPDCRSY 128
            P  + QV+ I + + +  NA+IV       L P LK+A E+G++V+T +S  +     +
Sbjct: 68  TPDPAAQVKVIEDLIAKNVNAIIVVPNDAKVLEPVLKKAREKGIVVLTHESP-DQQIGQW 126

Query: 129 YINQGTPEQLGGLLVDMAAEGVKKEKAKVAFFYSSPTVTDQNAWAEAA-KAKIAKEHPGW 187
            I     E+     VD  A+ +   K   A +  S TV   NAWA++A K + AK    +
Sbjct: 127 DIETIDSEKYAQANVDELAKDMGG-KGGYAIYVGSLTVPLHNAWADSAIKYQKAKYPDMF 185

Query: 188 EIVTTQYGYNDAQKSLQTAESILQTYPDLDAIIAPDANALPAAAQAAENLKRAEGVTIVG 247
           E+ +         KS  T   +++TYP +  II   +     A QA    +  + + +VG
Sbjct: 186 EVTSRLPVAESIDKSYATTLDLMKTYPQMKGIIGFGSLGPIGAGQAVAKKRAKDKIAVVG 245

Query: 248 FSTPNVMRPYIERGTIQRFGLWDVTQQGKISVFVADHVLKNGPMKVGEKLEIPGVGTVEV 307
            + P    PY+ RG I++  LWD    G   V VAD +L+    +V + L I G+G  +V
Sbjct: 246 IAMPAQAAPYLARGDIKKALLWDPKDAGYALVTVADQLLQG--KEVTKDLSIEGLGKADV 303

Query: 308 SANK 311
             +K
Sbjct: 304 DMDK 307