Pairwise Alignments

Query, 343 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 340 a.a., AI2 transporter (NCBI) from Escherichia coli BW25113

 Score =  521 bits (1341), Expect = e-152
 Identities = 260/337 (77%), Positives = 286/337 (84%), Gaps = 3/337 (0%)

Query: 7   KSSALAAALLAGTVLASGAAHAENQIAFIPKLVGVGFFTSGGAGAVKAGEEVGAKVTYDG 66
           K  AL +AL  G    S    A  +IAFIPKLVGVGFFTSGG GA +AG+E+G  VTYDG
Sbjct: 7   KKIALLSAL--GIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDG 64

Query: 67  PTEPSVSGQVQFINNFVNQGYNALIVSSVSPDGLCPALKRAMERGVLVMTWDSDVNPDCR 126
           PTEPSVSGQVQ INNFVNQGYNA+IVS+VSPDGLCPALKRAM+RGV V+TWDSD  P+CR
Sbjct: 65  PTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECR 124

Query: 127 SYYINQGTPEQLGGLLVDMAAEGVKKEKAKVAFFYSSPTVTDQNAWAEAAKAKIAKEHPG 186
           SYYINQGTP QLGG+LVDMAA  V K+KAKVAFFYSSPTVTDQN W + AKAKIAKEHPG
Sbjct: 125 SYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPG 184

Query: 187 WEIVTTQYGYNDAQKSLQTAESILQTYPDLDAIIAPDANALPAAAQAAENLKRAEGVTIV 246
           WEIVTTQ+GYNDA KSLQTAE IL+ Y DLDAIIAPDANALPAAAQAAENLK  + V IV
Sbjct: 185 WEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKN-DKVAIV 243

Query: 247 GFSTPNVMRPYIERGTIQRFGLWDVTQQGKISVFVADHVLKNGPMKVGEKLEIPGVGTVE 306
           GFSTPNVMRPY+ERGT++ FGLWDV QQGKISV+VAD +LK G MK G+KL+I GVG VE
Sbjct: 244 GFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVE 303

Query: 307 VSANKVQGYDYEADGNGIILLPERTVFTKENIGNFDF 343
           VS N VQGYDYEADGNGI+LLPER +F KENIG +DF
Sbjct: 304 VSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340