Pairwise Alignments

Query, 343 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 327 a.a., putative sugar ABC transporter periplasmic binding protein from Escherichia coli BL21

 Score = 66.6 bits (161), Expect = 8e-16
 Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 16/247 (6%)

Query: 11  LAAALLAGTVLASGAAHAENQIAFIPKLVGVGFFTSGGAGAVKAGEEVGAKVTY-DGPTE 69
           L  A L G+ L + AA  E  I  I  L   G++     G   A ++   +V   +   +
Sbjct: 12  LLMATLLGSALFARAADKEMTIGAI-YLDTQGYYAGVRQGVQDAAKDSSVQVQLIETNAQ 70

Query: 70  PSVSGQVQFINNFVNQGYNALIVSSVSPDGLCPALKRAMERGVLVMTWDSDVNPDCRSYY 129
             +S +  F++  V +  +A+I+S+VS +G    ++RA E G+ V+ +++ +N      Y
Sbjct: 71  GDISKESTFVDTLVARNVDAIILSAVSENGSSRTVRRASEAGIPVICYNTCINQKGVDKY 130

Query: 130 INQ---GTPEQLGGLLVDMAAE---GVKKEKAKVAFFYSSP---TVTDQNAWAEAAKAKI 180
           ++    G P + G  L + AA+     K ++ K+A          V  +  + E  K+++
Sbjct: 131 VSAYLVGDPLEFGKKLGNAAADYFIANKIDQPKIAVINCEAFEVCVQRRKGFEEVLKSRV 190

Query: 181 AKEHPGWEIVTTQYGYNDAQKSLQTAESILQTYPDLDAIIAPDANALPAAAQAAENLKRA 240
               PG +IV  Q G     K++   E ++ + PDL+AI+     A   A +A  N  +A
Sbjct: 191 ----PGAQIVANQEG-TVLDKAISVGEKLIISTPDLNAIMGESGGATLGAVKAVRNQNQA 245

Query: 241 EGVTIVG 247
             + + G
Sbjct: 246 GKIAVFG 252