Pairwise Alignments

Query, 325 a.a., C4-dicarboxylate transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

Subject, 333 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  112 bits (281), Expect = 1e-29
 Identities = 77/266 (28%), Positives = 135/266 (50%), Gaps = 8/266 (3%)

Query: 1   MKTLIAAAAMAALSFCGIANAQEYSLRFSTSQVNPN-EPIIKAMKTYAERVGERSGGRIA 59
           +KTL+AA A+ A    G  +AQ+ +++F+T   NP   PI+  M+ +AE V  +SGG+I 
Sbjct: 6   LKTLVAALAVTAF---GAVHAQDKTIKFATQ--NPKGHPIVMGMEKFAELVAAKSGGKIK 60

Query: 60  ITVMTGDQLGAQKKVNEMVMSGASLLSATDYGQLGQFVPDLSILAGPYVYPDLAATDRLF 119
           + +  G  LG+ +     +  G   +++ + G     V + +I   P+++ +    D + 
Sbjct: 61  VNLFPGGTLGSDQANVSAIQGGTLEMASMNSGIFASQVKEFAIYDFPFMFANTKEADAVV 120

Query: 120 ASDLYKDLSGKLEARGIKIIMPNGLFGYRHIIANK-PVRSPADLAGVTIRVPSSPIMMAT 178
                K L  KL+ +G+ I +     G+R+I  +K P+    DL G+ +RV  +PI +  
Sbjct: 121 DGPFGKKLHDKLQEKGL-IGLAYYELGFRNITNSKRPITKLEDLEGLKLRVIPNPINVDW 179

Query: 179 FGNYGARPTELPWGDVYNALQTGVVDAAEGPFGSIAGAKLNETRKVISKTGHQIMFTAWV 238
               GA PT LP+ +VY AL+   +D  E P   I   K  E +K +  + HQ    + +
Sbjct: 180 VKALGANPTPLPFPEVYAALEQKAIDGQENPVTVINANKFYEVQKYVVLSNHQYNPQSVI 239

Query: 239 ASSQFFNSLPEDLQTILLEEGQTIAK 264
            S +F+++L    + I+ +  Q  AK
Sbjct: 240 ISKKFWDTLDAAQKKIVADAAQESAK 265